Gene Spro_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1256 
Symbol 
ID5604472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1381854 
End bp1382786 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content59% 
IMG OID640936783 
Producturea amidolyase related protein 
Protein accessionYP_001477488 
Protein GI157369499 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0977176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.848518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA TCCTGCGTGC GGGCATTTAC ACTACGGTGC AGGATCTGGG CCGTAACGGT 
TTCCGTCGTC TGGGCGTTAG TCAGAGTGGG GCGCTTGACG AACCTGCCCT GAGGATCGCC
AACCTGCTGG TGGGCAATGC TGCCAACGCC GCCGGGCTGG AAATCACTCT CGGGCAATTT
AGCGCCGAAT TTACTCAGTC AGGTTGGATC GCTCTGACCG GTGCCGGCTG CGATGCGCAA
CTCGATGGCA AACCGCTGTG GACCGGCTGG CGCTATCCGG TGAATGCCGG CCAACAGCTG
ATACTGAAAA CGCCAAAACG CGGCATGCGC ACCTATCTGG CGATCAGTGG CGGCATCGCG
GTAGCGGAAA TGCTCGGCTC GCGCAGCACC GATAACAAAG CCGCTTTTGG TGGGCTGGAA
GGGCGTAATC TGCGGGATGG TGACAGCCTG CCGCTGGGGC AAAGCCATTC CTTGCCAAAG
CAGAGTTTTG GTGTGAAGCA ACCGCTGTTC AACAACCGCA TCCGCGCGTT GCCGGGGCCG
GAATATGATG AATTCAGCGA AGAGGCGAAA GAGGCTTTCT GGCGCACCGC CTGGCAACTG
AGCCCGCAGA GTAACCGCAT GGGTTATCGC CTGCACGGCA GCCATGCGTT AAACCGCACC
ACTGACCGCG AAATGTTATC GCACGGCCTG TTACCGGGGG TGGTGCAGGT ACCGCATAAC
GGCCAACCGA TTGTGCTGAT GGCCGATGCA CAGACTACCG GTGGTTACCC GCGTATTGCC
TGCGTGATCG AAGCCGATCT CTACCATTTG GCGCAGATCC GCCTGGGCGA GGCCATCCAC
TTTGTTCCCT GTACTTTGGC CGAGGCGCAA CGCGCCAGGG TCGAGCAGGA GCACTTTATC
CAACAGATTG CCTGGGGGTT AGATGATCGT TGA
 
Protein sequence
MLKILRAGIY TTVQDLGRNG FRRLGVSQSG ALDEPALRIA NLLVGNAANA AGLEITLGQF 
SAEFTQSGWI ALTGAGCDAQ LDGKPLWTGW RYPVNAGQQL ILKTPKRGMR TYLAISGGIA
VAEMLGSRST DNKAAFGGLE GRNLRDGDSL PLGQSHSLPK QSFGVKQPLF NNRIRALPGP
EYDEFSEEAK EAFWRTAWQL SPQSNRMGYR LHGSHALNRT TDREMLSHGL LPGVVQVPHN
GQPIVLMADA QTTGGYPRIA CVIEADLYHL AQIRLGEAIH FVPCTLAEAQ RARVEQEHFI
QQIAWGLDDR