Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1245 |
Symbol | |
ID | 5604004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1368859 |
End bp | 1371552 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640936772 |
Product | sensor protein KdpD |
Protein accession | YP_001477477 |
Protein GI | 157369488 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.011545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGAAG AGGAACAACA GCGCCCCGAC CCTGACAGCC TGCTGGCGCT GGCCAATGAA AAGCCCCGTG GCCGCCTGAA GGTGTTCTTC GGCGCTTGCG CCGGGGTAGG CAAAACCTAC GCCATGCTGC AGGAAGCCCA GCGGCTGCGT GCCCAGGGGC TGAACGTGCT GGTCGGCGTA GTGGAAACCC ATGGCCGCAG CGAAACCGCC GCGCTGCTGG GCGGGCTGGA TTTGCTGGCG CAAAAGCGCA TTCAGTATCG CGGCAGAATG GTACAAGAGT TTGATCTCGA CGCTGCATTG GCTCGCCACC CGGCATTGAT CCTGATGGAC GAGCTGGCGC ACAGCAACGC CCATGGCTCG CGCCATCCGA AGCGCTGGCA GGATGTCGAA GAGCTGCTGG ATGCCGGTAT CGACGTGCTG ACCACCGTCA ACGTACAACA TCTGGAAAGC CTGAACGACG TGGTCGGCGG CGTGACCGGG GTACGGGTAC GTGAAACCGT GCCCGATCAC GTGTTCGACG AAGCCACCGA GGTGGTGCTG GTTGACCTGC CGCCGGACGA TCTGCGCCAG CGTCTGAATG AAGGCAAGGT GTATATCCCC GGTCAGGCCG AACGTGCCAT CGAGCACTTT TTCCGTAAGG GCAATCTGAT TGCCCTGCGC GAACTGGCAT TACGCCGCAC CGCCGATCGG GTCGATGACC AGATGCGCGC CTTCCGCGAC ACTCAGGGGC GTGAACGCGT GTGGCATACC CGCGACAGTA TCCTGTTGTG CGTCGGCCAT AACAGCGGCA ACGAAAAACT GGTGCGTATC GCCGCCCGCC TGGCGGCCCG GCTGGGCTGC CACTGGCACG CAGTCTATGT CGAAACGCCC AAATTGCACC GTTTACCGGA GAGCCAGCGC CGGGCAATTT TGCGAGCGCT GCGGCTGGCG CAGGAGTTGG GGGCCGAAAC CGCCACCCTG TCCGAACCTG ATGAAGAACG CGCGGTGCTG CGTTACGCCC GTGAGCACAA CCTGGGCAAA ATCATTATTG GCCGTCGCAG CGAACAGCGC TGGAAACTAC GCGGCAGCTT TGCCGATCGC CTCGGCAAGT TGGGTCCGGA CCTCGATCTG GTGATTGTCG CGCTGGAAAA CGACAGCCCC CCGCAGCCAG GCAAAGAACA CGACAGCCGC AACTTTGGCG AGAAATGGCG TATGCAACTG CGTGGCTGTG CCGTCGCCGT CGCACTCTGC GCCCTGATCA CTCTGCTGTC CCAGTGGCTG CTGCCGGGGT TCGACCAGGC CAATCTGGTG ATGGTCTACC TGCTTGGCGT GGCCATTGTC GCGCTGTTCT TCGGCCGCTG GCCGTCGGTG CTGGCGGCGG TGATCAACGT CGCCAGTTTT GACCTGTTTT TCGTCCAGCC GGAATGGTCG TTTGCCGTCA GCGATATGCA ATATCTGCTG ACCTTCGGCG TGATGCTGAC GGTCGGCATC ACTATCGGTA ACCTGACCGC CGGCGTACGT TATCAGGCGC GGGTGGCGCG CTACCGCGAG CAGCGGGCTC GTCATCTGTA TGAGATCTCC CGCGGGCTGA GCCAGGCGCT GACTACCGAA GACATCGCCA AAACCAGCCG CCACTTCCTC TCCAGCAGTT TCCAGGCCAA AACCGTGCTG CTGCTGCCAC AGGAAGACGG CAAGCTGCAG CAAATGGTCG GGGAAACCGG CGGGCTGCTG TCGGTAGATG AGGCTATTGC TCGCTGGAGT TTCGACAAGG GCATGCCGGC CGGAGCCGGT ACCGATACCC TGCCCGGCGT TCCCTATCAA CTGTTGCCGT TAGCCACGTC GAAACAAACC TTTGGCCTGT TGGCCATCGA GCCCAGCAAC CTGCGTCAGC TGATGGTGCC GGAACAACAG CGGCTGCTAC AGACTTTTGC GGTATTGATT GCCAGCGCGC TGGAACGCTT GCATTTGGCG CGCAGCGCCG AGGAAGCAAA ACTGGACGCC GAACGCGAAC AACTGCGCAA CTCGCTGCTG GCGGCGCTGT CCCACGATTT ACGCACTCCG CTGACGGTGC TGTTCGGCCA GGCAGAAATT CTGACGCTCG ATCTGGCGGC GGAAGGCTCC AACCATGCGA CCCAGGCCAG TCAGATCCGC CAGCAGGTGC TGAGCACCAC CCGGCTGGTG AACAACCTGC TGGATATGGC GCGTATTCAA TCCGGCGGTT TCAACCTGCG TAAAGAGTGG CAATCGCTGG AAGAGATCGT CGGCGCATCG CTGCATATGC TGGAGCCGCT GATGACTCAG CATCAAATCA AGGTTGAGCT ACCGGCGGAG CTGGTATTGG TTAATTGCGA CGGCAGCCTG CTGGAGCGCG TGTTCACTAA CCTGTTGGAA AATGCCAATA AATATGCCGG CTACGATGCT ACTATCGGTA TTCGTGCCCA TACTCTGCCA GAGTGGCTGG AAGTCGAAGT CTGGGACGAT GGGCCGGGCA TTCCCGAAGG GAAAATGCAG CTTATTTTCG ATAAGTTTTC TCGCGGCAAT AAAGAGTCGG CGATCCCCGG CGTGGGTTTG GGGTTAGCAA TTTGCCGTGC CATTATTGAA GTGCACGGTG GCCGTATCTG GGCCGAAAAC GGTGCCAACG GCGGTGCCAG TTTCCGCTTT GTGCTACCGC TGGAGAAACC GCCAGAAATA GACAGCGAAG CCTTTGATCT TTAA
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Protein sequence | MVEEEQQRPD PDSLLALANE KPRGRLKVFF GACAGVGKTY AMLQEAQRLR AQGLNVLVGV VETHGRSETA ALLGGLDLLA QKRIQYRGRM VQEFDLDAAL ARHPALILMD ELAHSNAHGS RHPKRWQDVE ELLDAGIDVL TTVNVQHLES LNDVVGGVTG VRVRETVPDH VFDEATEVVL VDLPPDDLRQ RLNEGKVYIP GQAERAIEHF FRKGNLIALR ELALRRTADR VDDQMRAFRD TQGRERVWHT RDSILLCVGH NSGNEKLVRI AARLAARLGC HWHAVYVETP KLHRLPESQR RAILRALRLA QELGAETATL SEPDEERAVL RYAREHNLGK IIIGRRSEQR WKLRGSFADR LGKLGPDLDL VIVALENDSP PQPGKEHDSR NFGEKWRMQL RGCAVAVALC ALITLLSQWL LPGFDQANLV MVYLLGVAIV ALFFGRWPSV LAAVINVASF DLFFVQPEWS FAVSDMQYLL TFGVMLTVGI TIGNLTAGVR YQARVARYRE QRARHLYEIS RGLSQALTTE DIAKTSRHFL SSSFQAKTVL LLPQEDGKLQ QMVGETGGLL SVDEAIARWS FDKGMPAGAG TDTLPGVPYQ LLPLATSKQT FGLLAIEPSN LRQLMVPEQQ RLLQTFAVLI ASALERLHLA RSAEEAKLDA EREQLRNSLL AALSHDLRTP LTVLFGQAEI LTLDLAAEGS NHATQASQIR QQVLSTTRLV NNLLDMARIQ SGGFNLRKEW QSLEEIVGAS LHMLEPLMTQ HQIKVELPAE LVLVNCDGSL LERVFTNLLE NANKYAGYDA TIGIRAHTLP EWLEVEVWDD GPGIPEGKMQ LIFDKFSRGN KESAIPGVGL GLAICRAIIE VHGGRIWAEN GANGGASFRF VLPLEKPPEI DSEAFDL
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