Gene Spro_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1245 
Symbol 
ID5604004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1368859 
End bp1371552 
Gene Length2694 bp 
Protein Length897 aa 
Translation table11 
GC content61% 
IMG OID640936772 
Productsensor protein KdpD 
Protein accessionYP_001477477 
Protein GI157369488 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAAG AGGAACAACA GCGCCCCGAC CCTGACAGCC TGCTGGCGCT GGCCAATGAA 
AAGCCCCGTG GCCGCCTGAA GGTGTTCTTC GGCGCTTGCG CCGGGGTAGG CAAAACCTAC
GCCATGCTGC AGGAAGCCCA GCGGCTGCGT GCCCAGGGGC TGAACGTGCT GGTCGGCGTA
GTGGAAACCC ATGGCCGCAG CGAAACCGCC GCGCTGCTGG GCGGGCTGGA TTTGCTGGCG
CAAAAGCGCA TTCAGTATCG CGGCAGAATG GTACAAGAGT TTGATCTCGA CGCTGCATTG
GCTCGCCACC CGGCATTGAT CCTGATGGAC GAGCTGGCGC ACAGCAACGC CCATGGCTCG
CGCCATCCGA AGCGCTGGCA GGATGTCGAA GAGCTGCTGG ATGCCGGTAT CGACGTGCTG
ACCACCGTCA ACGTACAACA TCTGGAAAGC CTGAACGACG TGGTCGGCGG CGTGACCGGG
GTACGGGTAC GTGAAACCGT GCCCGATCAC GTGTTCGACG AAGCCACCGA GGTGGTGCTG
GTTGACCTGC CGCCGGACGA TCTGCGCCAG CGTCTGAATG AAGGCAAGGT GTATATCCCC
GGTCAGGCCG AACGTGCCAT CGAGCACTTT TTCCGTAAGG GCAATCTGAT TGCCCTGCGC
GAACTGGCAT TACGCCGCAC CGCCGATCGG GTCGATGACC AGATGCGCGC CTTCCGCGAC
ACTCAGGGGC GTGAACGCGT GTGGCATACC CGCGACAGTA TCCTGTTGTG CGTCGGCCAT
AACAGCGGCA ACGAAAAACT GGTGCGTATC GCCGCCCGCC TGGCGGCCCG GCTGGGCTGC
CACTGGCACG CAGTCTATGT CGAAACGCCC AAATTGCACC GTTTACCGGA GAGCCAGCGC
CGGGCAATTT TGCGAGCGCT GCGGCTGGCG CAGGAGTTGG GGGCCGAAAC CGCCACCCTG
TCCGAACCTG ATGAAGAACG CGCGGTGCTG CGTTACGCCC GTGAGCACAA CCTGGGCAAA
ATCATTATTG GCCGTCGCAG CGAACAGCGC TGGAAACTAC GCGGCAGCTT TGCCGATCGC
CTCGGCAAGT TGGGTCCGGA CCTCGATCTG GTGATTGTCG CGCTGGAAAA CGACAGCCCC
CCGCAGCCAG GCAAAGAACA CGACAGCCGC AACTTTGGCG AGAAATGGCG TATGCAACTG
CGTGGCTGTG CCGTCGCCGT CGCACTCTGC GCCCTGATCA CTCTGCTGTC CCAGTGGCTG
CTGCCGGGGT TCGACCAGGC CAATCTGGTG ATGGTCTACC TGCTTGGCGT GGCCATTGTC
GCGCTGTTCT TCGGCCGCTG GCCGTCGGTG CTGGCGGCGG TGATCAACGT CGCCAGTTTT
GACCTGTTTT TCGTCCAGCC GGAATGGTCG TTTGCCGTCA GCGATATGCA ATATCTGCTG
ACCTTCGGCG TGATGCTGAC GGTCGGCATC ACTATCGGTA ACCTGACCGC CGGCGTACGT
TATCAGGCGC GGGTGGCGCG CTACCGCGAG CAGCGGGCTC GTCATCTGTA TGAGATCTCC
CGCGGGCTGA GCCAGGCGCT GACTACCGAA GACATCGCCA AAACCAGCCG CCACTTCCTC
TCCAGCAGTT TCCAGGCCAA AACCGTGCTG CTGCTGCCAC AGGAAGACGG CAAGCTGCAG
CAAATGGTCG GGGAAACCGG CGGGCTGCTG TCGGTAGATG AGGCTATTGC TCGCTGGAGT
TTCGACAAGG GCATGCCGGC CGGAGCCGGT ACCGATACCC TGCCCGGCGT TCCCTATCAA
CTGTTGCCGT TAGCCACGTC GAAACAAACC TTTGGCCTGT TGGCCATCGA GCCCAGCAAC
CTGCGTCAGC TGATGGTGCC GGAACAACAG CGGCTGCTAC AGACTTTTGC GGTATTGATT
GCCAGCGCGC TGGAACGCTT GCATTTGGCG CGCAGCGCCG AGGAAGCAAA ACTGGACGCC
GAACGCGAAC AACTGCGCAA CTCGCTGCTG GCGGCGCTGT CCCACGATTT ACGCACTCCG
CTGACGGTGC TGTTCGGCCA GGCAGAAATT CTGACGCTCG ATCTGGCGGC GGAAGGCTCC
AACCATGCGA CCCAGGCCAG TCAGATCCGC CAGCAGGTGC TGAGCACCAC CCGGCTGGTG
AACAACCTGC TGGATATGGC GCGTATTCAA TCCGGCGGTT TCAACCTGCG TAAAGAGTGG
CAATCGCTGG AAGAGATCGT CGGCGCATCG CTGCATATGC TGGAGCCGCT GATGACTCAG
CATCAAATCA AGGTTGAGCT ACCGGCGGAG CTGGTATTGG TTAATTGCGA CGGCAGCCTG
CTGGAGCGCG TGTTCACTAA CCTGTTGGAA AATGCCAATA AATATGCCGG CTACGATGCT
ACTATCGGTA TTCGTGCCCA TACTCTGCCA GAGTGGCTGG AAGTCGAAGT CTGGGACGAT
GGGCCGGGCA TTCCCGAAGG GAAAATGCAG CTTATTTTCG ATAAGTTTTC TCGCGGCAAT
AAAGAGTCGG CGATCCCCGG CGTGGGTTTG GGGTTAGCAA TTTGCCGTGC CATTATTGAA
GTGCACGGTG GCCGTATCTG GGCCGAAAAC GGTGCCAACG GCGGTGCCAG TTTCCGCTTT
GTGCTACCGC TGGAGAAACC GCCAGAAATA GACAGCGAAG CCTTTGATCT TTAA
 
Protein sequence
MVEEEQQRPD PDSLLALANE KPRGRLKVFF GACAGVGKTY AMLQEAQRLR AQGLNVLVGV 
VETHGRSETA ALLGGLDLLA QKRIQYRGRM VQEFDLDAAL ARHPALILMD ELAHSNAHGS
RHPKRWQDVE ELLDAGIDVL TTVNVQHLES LNDVVGGVTG VRVRETVPDH VFDEATEVVL
VDLPPDDLRQ RLNEGKVYIP GQAERAIEHF FRKGNLIALR ELALRRTADR VDDQMRAFRD
TQGRERVWHT RDSILLCVGH NSGNEKLVRI AARLAARLGC HWHAVYVETP KLHRLPESQR
RAILRALRLA QELGAETATL SEPDEERAVL RYAREHNLGK IIIGRRSEQR WKLRGSFADR
LGKLGPDLDL VIVALENDSP PQPGKEHDSR NFGEKWRMQL RGCAVAVALC ALITLLSQWL
LPGFDQANLV MVYLLGVAIV ALFFGRWPSV LAAVINVASF DLFFVQPEWS FAVSDMQYLL
TFGVMLTVGI TIGNLTAGVR YQARVARYRE QRARHLYEIS RGLSQALTTE DIAKTSRHFL
SSSFQAKTVL LLPQEDGKLQ QMVGETGGLL SVDEAIARWS FDKGMPAGAG TDTLPGVPYQ
LLPLATSKQT FGLLAIEPSN LRQLMVPEQQ RLLQTFAVLI ASALERLHLA RSAEEAKLDA
EREQLRNSLL AALSHDLRTP LTVLFGQAEI LTLDLAAEGS NHATQASQIR QQVLSTTRLV
NNLLDMARIQ SGGFNLRKEW QSLEEIVGAS LHMLEPLMTQ HQIKVELPAE LVLVNCDGSL
LERVFTNLLE NANKYAGYDA TIGIRAHTLP EWLEVEVWDD GPGIPEGKMQ LIFDKFSRGN
KESAIPGVGL GLAICRAIIE VHGGRIWAEN GANGGASFRF VLPLEKPPEI DSEAFDL