Gene Spro_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1242 
Symbol 
ID5603968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1367168 
End bp1367824 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID640936769 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001477474 
Protein GI157369485 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000724616 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCACC GTTTAGATTC ACACCGTCGT CACGGCGGTC ACCCTGAGCA CGAAGAAGGG 
CACTGTCATC ATCATCGCCG CCGCGGCGGA CGTCATCACT TTGGCGGCGA TCACGGCGAA
GAGCATGGCC GGGGCGGACG CGGCGGTCGT GGTGGCCGTC ACCGCATGTT TGAACATGGG
GACCTGCGGT TGGTGCTGTT GGCGCTGGTG GCACGCAAAC CGAGCCACGG TTATGAACTG
ATCAAGGCCA TTGATGAGGC TTCTTCCGGT CTGTACGTGC CAAGCCCGGG GGTGATTTAC
CCGACGCTGA CGCTGTTGGA AGAACAGGAT TTCCTCGAGC CAATCACCAG CAGCAACGGC
CGTAAGAGTT ATCAGATCAC CGAACTGGGG CAGAATGAAT TACAAAAGCA CCAGGCCGTT
GTCGACGTGA TCCTGGCCCG TTTGGCCGGT GCCGATCGCG GTCATCATCA TCACGGCAAT
CTGGCAGAGG GCATCTCTGA TGCCATGAAC CGCCTGCGCA GTTTGCTACG CGGCAACGTG
ATGCGTGCCG ATCTTTCCGC GCAGCAGGTG GAACGCATTA ATGCTGCGTT GCTCACCGCC
GTGGCGGCGA TTGAAAGCGA AATGAACATT ACCCCGACGG CACAGGAGAA TGAATAA
 
Protein sequence
MFHRLDSHRR HGGHPEHEEG HCHHHRRRGG RHHFGGDHGE EHGRGGRGGR GGRHRMFEHG 
DLRLVLLALV ARKPSHGYEL IKAIDEASSG LYVPSPGVIY PTLTLLEEQD FLEPITSSNG
RKSYQITELG QNELQKHQAV VDVILARLAG ADRGHHHHGN LAEGISDAMN RLRSLLRGNV
MRADLSAQQV ERINAALLTA VAAIESEMNI TPTAQENE