| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1234 |
|---|
| Symbol | |
|---|
| ID | 5603730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1358257 |
|---|
| End bp | 1359309 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640936761 |
|---|
| Product | UDP-glucose 4-epimerase |
|---|
| Protein accession | YP_001477466 |
|---|
| Protein GI | 157369477 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0382166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.453706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATAT TGGTGACGGG CGGCGCCGGT TATATCGGCT CGCATACGGT GTTGGCACTG
TTGGAAAGGG GGGAGGAAGT TGTCGTACTG GACAACCTGT CCAACAGTTC GTCAGAGTCT
TTGTTTCGGG TCGAGCGATT AACCGGTAAA AAAGTGAATT TTTATCATGG AGATATCCAG
CAACACCATT TGTTGGATCA TATATTTCGT CAGCATGATG TTCATGCGGT TATTCATCTT
GCGGGGTTGA AATCGGTCAG GGAATCTACC GAAGAACCGC TGAAATATTA TCAAAATAAT
ATTTCCGGCT CATTGATCGT ACTGGACAGA ATGCGCCATG CCGGCGTTAA GCAATTTATT
TTCAGCTCTT CAGCCACCGT CTACGGACCG GCGGAATATA CCCCGCTGAC GGAGAATTGC
CGTGTTGGGC AGACCACCAA TCCTTATGGA ACTTCCAAGC TGATTGTCGA GCAGATCCTC
GCGGAGTTTG CTTCCACGGC CCCGCAGATG GCGATCACCG CGCTGCGTTA CTTTAATCCG
GCCGGGGCGC ACGAGTCCGG CTTGATTGGT GAGGATCCCG CCGGCATTCC CAATAATCTT
CTGGCTTATC TGGCGCAGGT GGCTATTGGC AAACTCGCGG TGTTGCCGGT GTATGGCAAC
GACTACCCTA CCAGCGATGG TACCGGGGTA CGTGATTACA TTCACGTTAT GGATTTGGCC
GAAGGGCATT TGAAAGCGCT GGATAACCTG CAGCCAGGTT TTAACGTCTA TAACCTGGGC
ACCGGCAAAG GCTACTCGGT GCTGGAGATT ATTCGGGCGT TTGAACGCGC CTGTGGCTTC
AAAATCGCCT ACCAATTTAA TCCCCGGCGT GCGGGAGATA TTGCCGAGTG TTGGTCCGAC
CCATCGTTGG CGGCAGAAAA GCTGGGCTGG CAAGCTAAAC GCAGTCTGGA AAAAATGGTG
TGTGATGCCT GGTCATGGCA AAGCAAAAAT CCGCAGGGTT ACAGCCGTTG TGCATCGATG
CCATCGATGA GGATGCTGGC CGATGAAGCT TAA
|
|---|
| Protein sequence | MAILVTGGAG YIGSHTVLAL LERGEEVVVL DNLSNSSSES LFRVERLTGK KVNFYHGDIQ
QHHLLDHIFR QHDVHAVIHL AGLKSVREST EEPLKYYQNN ISGSLIVLDR MRHAGVKQFI
FSSSATVYGP AEYTPLTENC RVGQTTNPYG TSKLIVEQIL AEFASTAPQM AITALRYFNP
AGAHESGLIG EDPAGIPNNL LAYLAQVAIG KLAVLPVYGN DYPTSDGTGV RDYIHVMDLA
EGHLKALDNL QPGFNVYNLG TGKGYSVLEI IRAFERACGF KIAYQFNPRR AGDIAECWSD
PSLAAEKLGW QAKRSLEKMV CDAWSWQSKN PQGYSRCASM PSMRMLADEA
|
|---|
| |