| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1228 |
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| Symbol | |
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| ID | 5603592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 1348091 |
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| End bp | 1350037 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640936755 |
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| Product | PTS system N-acetyl glucosamine specific transporter subunits IIABC |
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| Protein accession | YP_001477460 |
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| Protein GI | 157369471 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components
[COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.182108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.10117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACATAC TCGGCTTTTT CCAAAGATTG GGCAGGTCGT TACAACTGCC AATCGCAGTA
CTGCCCGTTG CGGCGCTTTT GCTACGCTTC GGCCAGCCTG ATTTACTGAA TATTTCATTC
ATCGCACAGG CCGGTGGATC AATCTTCGAT AACCTGGCGT TAATCTTTGC TATCGGTGTG
GCGGCAACCT GGTCGAAAGA CAATGCCGGT TCAGCCGCAT TGGCGGGCGC GGTGGGTTAC
TTCATCCTGA CCAAGGCAAT GGTCACCATT AACCCGGCGA TCAATATGGG TGTGCTGGCG
GGTATCATTA CCGGCCTGGT GGGCGGTGCG GTCTATAACC GCTGGTCCGG CATCAAACTG
CCCGAGTTCC TCTCCTTCTT CGGCGGCAAG CGTTTCGTCC CAATCGCTAC CGGCTTTTTC
TGTTTAATCC TTGCTGCCAT CTTTGGTTAT ATCTGGCCAC CGGTACAAAA TGCGATCCAC
GCAGGCGGTG AATGGATTGT TTCGATGGGC GCTATCGGTT CCGGTATTTT CGGCTTCGTT
AACCGTCTGC TGATCCCAAC CGGTCTGCAT CAGGTTCTGA ACACCATTGC CTGGTTCCAG
ATTGGTGAGT TTACCAACGC TGCCGGTACC ATCTTCCATG GCGACATCAA CCGCTTCTAC
GCGGGTGACG GTACTGCCGG GATGTTCATG TCAGGCTTCT TCCCGATCAT GATGTTCGGT
TTGCCGGGTG CGGCATTGGC CATGTACTTC GCTGCGCCGA AAGAACGTCG CCCAATGGTT
GGCGGTATGC TGCTGTCCGT TGCGCTGACC GCATTCCTGA CCGGTGTGAC CGAGCCGCTT
GAATTCCTGT TCATGTTCCT GGCTCCGCTG CTGTATCTGG TCCACGCCAT TTTGACCGGT
ATCAGCCTGT TTGTAGCCAC CTTGCTGGGT ATTCACGCCG GGTTCTCCTT CTCTGCAGGT
GCCATCGACT ATGTGCTGAT GTACAACCTG CCGGCTGCGA GCAAGAACGT CTGGATGCTG
GTGTTGATGG GTCTGGTCGC CTTCGCGGTG TACTTCGTCC TGTTCTCCGT CATTATCCGT
GCATTCAACC TGAAAACCCC GGGCCGTGAA GATGCGTCCG ACGATGTCGT CGCACCTGAA
GCCAACAGCA ATACCGATGA AGGCCTGCGC GCACTGTCCC GCAGCTATAT TGGTGCCATC
GGCGGTTCTG ACAACCTGAC CGGCATTGAT GCCTGTATCA CCCGTTTACG CCTGACCGTT
AAAGACTCTT CTAAAGTGCT GGATGCCAGC TGTAAACGCC TGGGTGCATC AGGCGTGGTG
AAACTGAACA AGCAAACCGT TCAGGTTATC GTGGGTTCTA AAGCCGAAGC CATTGCTGAC
GGCATGCGTG CGGTGATTGC TGCCGGCCCG GTGCCTGCGG CAGAAGTGGC ACCGGCTCCA
GGCGTGGCTG CGGTTAAATC GCAGGCAGTG CCTAATACGC CGAAGGTGGC CTTCGAGTCG
CTGGTGGCCC CGGTGACTGG TGAAGTCGTG GCCCTGGATC AGGTGCCTGA CGAAGCCTTT
GCCAGCAAAG CGGTAGGCGA CGGCCTGGCG ATTCGCCCGA CCGACAAAAC CGTAGTAGCA
CCGGCAGATG GCACCATCGT GAAAATCTTC AACACCAACC ACGCTTTCTG TCTGGAAACC
GACAAGGGCG CGGAGATTGT GGTGCACATG GGGATCGACA CCGTGGCATT GAACGGTCAG
GGCTTCAAAC GTCTGGTTGA AGAGGGGGCT GAGGTGAAAG CCGGCCAGCC AATCCTTGAA
TTGGATCTGG AGTTCCTGAA CGCCAATGCC CGCTCGATGA TAAGCCCGGT AGTGGTCAGC
AACTCTGACG ATTACGCTGG CCTGACGGCG CTGGCGACCG GTTCTGTAGT AGCCGGCCAG
ACCAAACTGT TCGAGATCCA GAAATAA
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| Protein sequence | MNILGFFQRL GRSLQLPIAV LPVAALLLRF GQPDLLNISF IAQAGGSIFD NLALIFAIGV
AATWSKDNAG SAALAGAVGY FILTKAMVTI NPAINMGVLA GIITGLVGGA VYNRWSGIKL
PEFLSFFGGK RFVPIATGFF CLILAAIFGY IWPPVQNAIH AGGEWIVSMG AIGSGIFGFV
NRLLIPTGLH QVLNTIAWFQ IGEFTNAAGT IFHGDINRFY AGDGTAGMFM SGFFPIMMFG
LPGAALAMYF AAPKERRPMV GGMLLSVALT AFLTGVTEPL EFLFMFLAPL LYLVHAILTG
ISLFVATLLG IHAGFSFSAG AIDYVLMYNL PAASKNVWML VLMGLVAFAV YFVLFSVIIR
AFNLKTPGRE DASDDVVAPE ANSNTDEGLR ALSRSYIGAI GGSDNLTGID ACITRLRLTV
KDSSKVLDAS CKRLGASGVV KLNKQTVQVI VGSKAEAIAD GMRAVIAAGP VPAAEVAPAP
GVAAVKSQAV PNTPKVAFES LVAPVTGEVV ALDQVPDEAF ASKAVGDGLA IRPTDKTVVA
PADGTIVKIF NTNHAFCLET DKGAEIVVHM GIDTVALNGQ GFKRLVEEGA EVKAGQPILE
LDLEFLNANA RSMISPVVVS NSDDYAGLTA LATGSVVAGQ TKLFEIQK
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