| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1217 |
|---|
| Symbol | |
|---|
| ID | 5603389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1334211 |
|---|
| End bp | 1334684 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640936738 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001477449 |
|---|
| Protein GI | 157369460 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.06226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.585303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGG TGATTTTGGA TCTGCAGCTG GCCTGTGCAG ATAACAGTGG CCTGCCGGAT
GAAGCCACCT TCCAGCGCTG GCTGGAAGGC GTGCTGCCGC AGTTTCAGGA AGAAGCGGAG
GTCACCATTC GCCTGGTGGA TGAAGCCGAA AGCAATGAAC TGAACCTGAC TTATCGTGGC
ATGGACAAAC CGACCAACGT GTTGTCATTC CCGTTCGAAG CTCCCCCGGG TATCGAGCTG
CCGCTGCTTG GCGATCTGAT CATCTGCCGT CAGGTGGTTG AACGGGAAGC CGCTGAGCAA
GACAAGGCGC TGGAGGCCCA CTGGGCGCAT ATGGTTGTCC ATGGCAGCCT TCATCTGCTA
GGGTATGACC ACATCGAAGA CGATGAAGCC GAAGAAATGG AGTCTTTGGA AACCGAAATC
ATGCACGGAC TGGGTTACCC GGACCCGTAC CTGGCGGAAA AAGACCCCCT CTGA
|
|---|
| Protein sequence | MSQVILDLQL ACADNSGLPD EATFQRWLEG VLPQFQEEAE VTIRLVDEAE SNELNLTYRG
MDKPTNVLSF PFEAPPGIEL PLLGDLIICR QVVEREAAEQ DKALEAHWAH MVVHGSLHLL
GYDHIEDDEA EEMESLETEI MHGLGYPDPY LAEKDPL
|
|---|
| |