Gene Spro_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1213 
Symbol 
ID5603066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1329494 
End bp1330234 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID640936734 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001477445 
Protein GI157369456 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.970615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.897978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAG ATTGGAACTG GGGTATCTTC CTGCAGCAGG CCCCGTTTGG GAATACCACT 
TACCTCGGCT GGATTTGGTC CGGCTTTCAG GTCACGGTAG CCCTCTCCGT CTGTGCATGG
ATTATCGCTT TCTTTGTCGG TTCGCTATTC GGTATTTTGC GTACCGTACC CAACCGCTTT
CTTTCCACCC TCGGTACCTG TTACGTCGAA CTGTTCCGTA ACGTGCCGCT GATCGTGCAA
TTCTTTACCT GGTATCTGGT GATCCCGGAA CTGCTGCCGG CCAATATGGG CATGTGGTTC
AAAACCGAAC TCGATCCTAA CGTGCAGTTC TTCGTTTCCT CGATGCTGTG CCTGGGGCTG
TTTACCGCCG CCCGCGTATG CGAACAGGTA CGCGCTGCCA TTCAGTCACT GCCACGCGGT
CAGAGAGCCG CCGGACTGGC CATGGGCCTG ACGCTGCCGC AAACCTATCG CTACGTGCTG
TTGCCGAACG CCTATCGGGT GATTGTGCCG CCGATGACCT CGGAAATGCT TAACCTGGTT
AAAAACTCCG CCATTGCTTC CACCATCGGG CTGGTCGACA TGGCTGCGCA GGCCGGCAAA
CTGCTGGATT ACTCCGCGCA TGCCTATGAA TCCTTTACCG CGATTACGCT GGCCTACATC
GCCATCAACG CCGTGATCAT GCTGTTTATG CGACTGGTAG AGCGAAAAGT GCAGTTGCCC
GGCAATCTGG GGAGTAAATA A
 
Protein sequence
MSIDWNWGIF LQQAPFGNTT YLGWIWSGFQ VTVALSVCAW IIAFFVGSLF GILRTVPNRF 
LSTLGTCYVE LFRNVPLIVQ FFTWYLVIPE LLPANMGMWF KTELDPNVQF FVSSMLCLGL
FTAARVCEQV RAAIQSLPRG QRAAGLAMGL TLPQTYRYVL LPNAYRVIVP PMTSEMLNLV
KNSAIASTIG LVDMAAQAGK LLDYSAHAYE SFTAITLAYI AINAVIMLFM RLVERKVQLP
GNLGSK