Gene Spro_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1196 
SymbollipB 
ID5602900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1312730 
End bp1313398 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID640936717 
Productlipoate-protein ligase B 
Protein accessionYP_001477428 
Protein GI157369439 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTT TGCAACCAGA CAAGATCATT TTGCGTCAGC TGGGGTTGCA GCCCTATGAG 
CCTGTATCCC AAGCCATGCA CAACTTCACC GATCGCCGAA CCGAAACCAC GCCCGATGAG
CTGTGGCTGG TTCAGCATCA GCCCGTATTT ACCCAGGGCC AGGCCGGTAA AGCAGAGCAT
CTGTTAATGC CGGGCGACAT TCCGGTTGTC CAGAGCGATC GCGGTGGCCA GGTAACCTAC
CATGGGCCGG GTCAGCAGGT GATGTACGTG ATGATCGATC TGAAACGCAA CAAGGTTGGC
GTTCGCCAAC TGGTCACGGC TATCGAAGAT ACCGTTATTA ACACCCTCGC CCACTTTCAC
ATTGAATCGC GCGCCCGTCC GGATGCGCCC GGTGTTTACG TGGGGGAGCA AAAAATCTGT
TCGTTGGGTT TGCGGATCCG TAAAGGCAGT TCATTCCACG GCCTGGCCCT GAATGTGGCC
ATGGATCTCA GCCCCTTCCA GCGTATCAAC CCTTGCGGTT ACGCCGGCAT GCAGATGGCG
CAGGTCAGCG CGCTGGCACC CGGTGTTGGC ATAGAAGACG TACACCCAGT CCTGGTACAG
GAATTTGTTC ATTTACTCGG CTACCCGAAG GTCGAGCTTC GTAACTGGAA CCTGCACGAT
TATGAGTAA
 
Protein sequence
MTLLQPDKII LRQLGLQPYE PVSQAMHNFT DRRTETTPDE LWLVQHQPVF TQGQAGKAEH 
LLMPGDIPVV QSDRGGQVTY HGPGQQVMYV MIDLKRNKVG VRQLVTAIED TVINTLAHFH
IESRARPDAP GVYVGEQKIC SLGLRIRKGS SFHGLALNVA MDLSPFQRIN PCGYAGMQMA
QVSALAPGVG IEDVHPVLVQ EFVHLLGYPK VELRNWNLHD YE