Gene Spro_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1164 
Symbol 
ID5602557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1281628 
End bp1282350 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content57% 
IMG OID640936684 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_001477396 
Protein GI157369407 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000107116 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00427171 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACGC TGTTCATCGC AGATCTGCAT TTAAGCGCAC AGGAACCGGC AATCACTGCC 
GGTTTTCTGC GTTTTTTGCG GCAAGATGCC ATTCACGCCG ACGCCCTGTA CATTCTTGGC
GACCTGTTTG AAGCCTGGAT CGGCGATGAC GATCCCGAGC CATTGCACGG CGAAATCGCT
GCGGCACTGA AGGCGCTGCA ACAGGCTGGC GTACCCTGCT ACTTTATCCA CGGCAACCGT
GATTTTCTGG TCGGCAAACG CTTTGCCCGT ACCAGCGGTA TGCAACTGCT GCCGGAAGAG
CAGGTGCTGG ATCTGTATGG CCGAAAAATC CTGATCCTGC ATGGCGACAC GCTGTGTACC
GACGATCAGG CCTACCAACA GTTTCGCCGC AAGGTACACA ATCCGCTGAT CCAAAAACTG
TTTTTGGCCA TGCCGCTGCG CTGGCGTCTT AAGATCGCGG CCAAAATGCG TGCCCGCAGC
CAGCAGAGTA ACCAGTACAA GTCGGACTCT ATTATGGACG TCAACCCACA GGCGGTTGAG
CAGGCGATGC TGCGCCACAA GGTTCACTGG ATGATCCACG GTCACACTCA CCGTCCGGCG
GTGCATGAAT TGGCATTGAG CAACGGCAAG GCCCACCGCG TGGTGCTGGG AGCCTGGCAC
GTTGAAGGCT CCATGATCAA AGTCAGTGCC GACGCCGTCG AGCTGATCCA ATTCCCGTTC
TAA
 
Protein sequence
MNTLFIADLH LSAQEPAITA GFLRFLRQDA IHADALYILG DLFEAWIGDD DPEPLHGEIA 
AALKALQQAG VPCYFIHGNR DFLVGKRFAR TSGMQLLPEE QVLDLYGRKI LILHGDTLCT
DDQAYQQFRR KVHNPLIQKL FLAMPLRWRL KIAAKMRARS QQSNQYKSDS IMDVNPQAVE
QAMLRHKVHW MIHGHTHRPA VHELALSNGK AHRVVLGAWH VEGSMIKVSA DAVELIQFPF