Gene Spro_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1161 
Symbol 
ID5604642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1278730 
End bp1279746 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content58% 
IMG OID640936681 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_001477393 
Protein GI157369404 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0299848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000414813 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATTC TGGTGACCGG CGGCGCCGGC TACATTGGTT CACATACGGT GTTGGCTTTG 
CTGGAACGTG GTGAAGATGT GGTGGTGCTG GATAATTTGA TCAACGCGTC CGAAGAGTCT
TTGCGCCGCG TGGAGCAACT GACGGGCAGG GCCGCGACGT TTTATCGGGG AGATGTACAG
GATGCCGGCT GCCTGAAGCG TATCTTTGAG GAAAACAACG TTGCCTCAGT GATCCACTTT
GCCGGCCTGA AGGCGGTGGG GGAGTCCACC CAAAAACCGC TGGAGTACTA TCAGAATAAC
GTGGCCGGTA CCTTGGTGTT GCTGGAGGCG ATGCGCGAGG CGGGAGTCCA TCAGTTCATC
TTCAGCTCTT CCGCCACGGT GTACGGCGAA CATGCGCCGG TACCTTACCG GGAAGATATG
CCGATTGGCG GCACTACCAG CCCTTACGGC ACCTCCAAAT GGATGGTGGA GCAGGTCCTG
CAGGACTTTG CCAGGGCTGA ACCGGCATTT TCGATTATCG CGCTGCGCTA CTTCAACCCG
GTAGGCGCAC ATGAGTCGGG CCTGATTGGC GAAGACCCGA GTGGGATCCC CAATAATCTG
CTGCCTTATA TCGCGCAGGT GGCCATCGGT CAGCGGGAAA CTCTGAGCGT GTTTGGCGGC
GACTATCCAA CCAAGGACGG CACGGGCGTG CGCGACTACA TTCACGTGAT GGATGTGGCG
CAAGGCCATC TGGCGGCGAT GGATCATTTA GCGCAGATTG CCGGGTTTAA AGCCTATAAC
CTGGGCTCCG GGGTCGGTTA CTCGGTGCTG GAAATGGTGC GGGCGTTTGA AAAAGCCTCG
GGCGTGACTA TTCCTTATCA GATTTTACCG CGCCGTGCGG GCGACCTGCC TGCCTTCTGG
GCCGATGCCG GGTTGGCAAA ACAGGAACTG GGCTGGCAAG TGCAGCGCGG GCTTGACGTG
ATGATGCGTG ATACCTGGAA CTGGCAAAGC AAAAATCCGC AGGGCTATCG CCGTTAA
 
Protein sequence
MSILVTGGAG YIGSHTVLAL LERGEDVVVL DNLINASEES LRRVEQLTGR AATFYRGDVQ 
DAGCLKRIFE ENNVASVIHF AGLKAVGEST QKPLEYYQNN VAGTLVLLEA MREAGVHQFI
FSSSATVYGE HAPVPYREDM PIGGTTSPYG TSKWMVEQVL QDFARAEPAF SIIALRYFNP
VGAHESGLIG EDPSGIPNNL LPYIAQVAIG QRETLSVFGG DYPTKDGTGV RDYIHVMDVA
QGHLAAMDHL AQIAGFKAYN LGSGVGYSVL EMVRAFEKAS GVTIPYQILP RRAGDLPAFW
ADAGLAKQEL GWQVQRGLDV MMRDTWNWQS KNPQGYRR