| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1159 |
|---|
| Symbol | |
|---|
| ID | 5604640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1274423 |
|---|
| End bp | 1276855 |
|---|
| Gene Length | 2433 bp |
|---|
| Protein Length | 810 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640936679 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001477391 |
|---|
| Protein GI | 157369402 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000184343 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCTGGC GCTGGTTTTG GCGTGAGTGG CGTTCACCGT CACTGCTGAT CGTCTGGCTG
GCGCTGACGC TGTCGATGGC CTGCGTATTG GCATTGGGCA GTATCAGCGA TCGTATGGAC
AAAGGTCTGA GCCAGCAGAG CCGCGATTTT ATTGCCGGCG ATCGGGTACT GCGCAGCGCC
CGGCCGGTGC CGGAAGGCTG GCTGCTGGAC GCGCAACAAC AGGGGCTGAA AGTCAGTCGA
CAGTTGTCGT TCACCACCAT GACCTATGCC GGCGATCGGC CCCAGTTGGC AGACGTGAAG
GCCACCGATC TTGCCTATCC GCTGTACGGC AAGCTGGAGA CCCGCCCGGC CAACGTTAAA
CTGACGCCGG GGAGCGTGCT GGTGGCGCCA CGTTTGTTGG CGTTGTTGAA CGTGAAGGTC
GGTGACAGGC TGGACGTGGG CGATACCAGC CTGCGCATTG CCGGTGAAAT TATTCAGGAG
CCGGATTCCG GCTTTAACCC TTTCCAGACG GCACCGCGCA TCATGATCAA TCTGGCGGAC
GTGGACAAAA CCGGGGCGGT GCAGCCGGGC AGCCGTCTGA CCTACCGTTA TATGTTTGCC
GGGGCTGCGG AGGATATCCA GCGTTATGAA GATCGCCTGA CGCCACAGCT TGGCCCCGAT
CAGCGCTGGT TTGGCTTGCA GGAGTCCGGT AGTGCATTGG GTAAATCGTT GCAACGCTCG
CAGCAGTTCC TGTTGCTGTC GGCGCTGCTG ACCTTGCTGC TGTCGATTGC CGCCGTCGCG
GTGGCGATGA GCCATTATTG CCGCAGCCGT TATGACTTGA TCGCGGTGTT GAAAACTCTG
GGGGCCGGCC GCAGCGCATT GCGTAAGTTG ATTATCGGCC AGTGGCTGGC TGTAATTCTG
CTGGCCGCCG TCGGAGGGGG CATTATCGGG CTGGGGTTTG AAGCGCTGCT GATCCGCCTG
CTGGCACCGG TGCTGCCGGC GGAACTGCCA GCCGCCGGGG CCTGGCCGTG GCTGTGGGCG
GTCGGCGCAT TGCTGATGAT TTCTCTGTTG GTGGGGCTGC GGCCGTACCG GCAGTTACTG
GCGACCCAGC CGCTGCGGGT GCTGCGCCGC GATGTGGTGG CCAACGTCTG GCCGCTGCGT
TATTTCCTGC CGCTAACGGC GGTGATTGTG GTGGCGCTGT TGACGGCATT GATGGGGGCC
AGCACGCTAC TGTGGTCGAT CCTCGCCGGT ATTCTGGTGC TGGCGCTGCT GTTGGGCGCT
ATCGGCTGGG GCAGCCTGTT ATTGCTGCGA CGCATTACGC TGAAGAATCT GGCACTGCGA
CTGGCGGTTA ACCGTCTGTT GCATCAACCC TGGGTCACGG TCAGCCAACT GGCGGCTTTC
TCGCTGTCGT TTATGTTGCT GGCGTTACTG CTGGTGCTGC GTGGCGATCT GCTTGAGCGT
TGGCAGCAGC AACTGCCACC GGACAGCCCG AATTACTTCC TGCTGAACAT GACTGAGGCG
CAGGTGCCAC AGGTGAAAAC CTTCCTGCAA CAGCATCAAG TTAAACCGGA AACCTACTAT
CCCATTGTCC GCGTGCGCCT GACCGAGATT AACCAGCAGG TGGCGACCGA ACGGGTGCAT
GAGGACGATC CGGGCGGCGA GGCGGTGAAT CGTGAGCTGA ACCTGACTTG GCTGGCAGAG
CTGCCGGCGC ACAATCCATT GCTGGCAGGC AGTTGGCCGC CGAAAGCCGG CGAGGTGTCG
ATGGATCAGG GCATTGCCGG ACGACTCAAG ATCAAACTGG GCGATACGCT GACCTTCAGC
GGCGATACCC AGTCGTTCAG CGCCAGGGTC ACCAGCCTGC GCCAGGTGGA TTGGGAAAGC
CTGAAACCGA ACTTTTACTT CATCTTCCCG CCGGGTGCGC TGGACGGTCA GCCGCAAACC
TGGCTCACCA GTTTCCGTTA CGACGGGGAC GGGCAGATGC TGACCCAGCT TAATCGCCAG
TTCCCGACGC TCAGCCTGCT GGATATAGGT TCGATCCTCA AACAGGTGGG CGGTGTGCTG
CAGCAGGTGA GCCGCGCGCT GGAAGTGATG GTGGTGCTGG TGGTGCTCTG CGGCGGTTTG
TTGCTGATGG CGCAGGTGCA GGTGGGTATG CGTCAGCGGC GTCAGGAACT GGTGGTGTAC
CGTACGCTCG GCGCCGGCAA GCGCCTGTTG CGCAGCACGC TGTGGTGTGA GTTTGCCCTG
TTGGGGCTGG TGGCGGGCAT TGCCGCCGCG GTGGGGGCAG AAGCGGCACT GTGGTTGCTG
CAAAGCCAGG TATTTGACTT CCCATGGGCG CCAACACCGG TGCTGTGGTG GGCACTGCCG
CTACTCAGTG CGTTGTTGCT GTCGCTGTGC GGTGGTTGGC TGGGCGTGCG CTTGCTGCGC
GGGCAGGCGC TGTTCCGCAG TTACGACGGT TAA
|
|---|
| Protein sequence | MIWRWFWREW RSPSLLIVWL ALTLSMACVL ALGSISDRMD KGLSQQSRDF IAGDRVLRSA
RPVPEGWLLD AQQQGLKVSR QLSFTTMTYA GDRPQLADVK ATDLAYPLYG KLETRPANVK
LTPGSVLVAP RLLALLNVKV GDRLDVGDTS LRIAGEIIQE PDSGFNPFQT APRIMINLAD
VDKTGAVQPG SRLTYRYMFA GAAEDIQRYE DRLTPQLGPD QRWFGLQESG SALGKSLQRS
QQFLLLSALL TLLLSIAAVA VAMSHYCRSR YDLIAVLKTL GAGRSALRKL IIGQWLAVIL
LAAVGGGIIG LGFEALLIRL LAPVLPAELP AAGAWPWLWA VGALLMISLL VGLRPYRQLL
ATQPLRVLRR DVVANVWPLR YFLPLTAVIV VALLTALMGA STLLWSILAG ILVLALLLGA
IGWGSLLLLR RITLKNLALR LAVNRLLHQP WVTVSQLAAF SLSFMLLALL LVLRGDLLER
WQQQLPPDSP NYFLLNMTEA QVPQVKTFLQ QHQVKPETYY PIVRVRLTEI NQQVATERVH
EDDPGGEAVN RELNLTWLAE LPAHNPLLAG SWPPKAGEVS MDQGIAGRLK IKLGDTLTFS
GDTQSFSARV TSLRQVDWES LKPNFYFIFP PGALDGQPQT WLTSFRYDGD GQMLTQLNRQ
FPTLSLLDIG SILKQVGGVL QQVSRALEVM VVLVVLCGGL LLMAQVQVGM RQRRQELVVY
RTLGAGKRLL RSTLWCEFAL LGLVAGIAAA VGAEAALWLL QSQVFDFPWA PTPVLWWALP
LLSALLLSLC GGWLGVRLLR GQALFRSYDG
|
|---|
| |