Gene Spro_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1156 
Symbol 
ID5603688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1272329 
End bp1273105 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID640936676 
Productshort chain dehydrogenase 
Protein accessionYP_001477388 
Protein GI157369399 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.565879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000930327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAAAG CAGTATTGAT AACCGGCTGT TCCAGCGGGA TTGGATTGAT TGCCGCGCAG 
GATCTGCGTA ACCGTGGCTA CCGGGTGCTG GCCGCCTGTC GCAAGCCGCA GGACGTTGAA
AATATGCGTC AGCTTGGGCT GGAAGGCATT GAGCTGGATC TGGACGACAG TGACAGCGTC
GAACGCGCCG CCGCACAGGT GATCGAACTG ACCGGCGGCC GCCTGTATGG CCTGTTCAAC
AACGGCGGTT TTGGCGTTTA CGGCCCGCTG AGCAGCATTT CGCGGCAGCA ATTGGAACGC
CAATTCGCCA CCAATCTGTT CGGCACCCAT CAATTAACCC AGCTGCTGTT GCCGGCGATG
CTGCCGCACG GCGAGGGGCG TATTATTCAG ACCAGTTCGG TTATGGGGCT GGTGTCCAGC
GCCGGGCGTG GTGCCTACGC CGCCAGCAAG TTTGCGCTGG AAGCCTGGTC CGACGCGCTG
CGGATGGAGC TGCACGGCAC GGGCATTCAG GTCAGCCTGA TTGAACCCGG CCCGCTCACC
ACCCACTTTA CCCAGAACGT CAATCAGGCC CAAAGCGACA AACCGGTGCA CAACCCAGGC
ATTGCCAAGC GCCTCACACT ACCGCCGGAA GCCATTTTGC CCAAACTGCG CCACGCGCTG
GAAAGCCCAA GGGCCAAGCT GCGGTATCCG GTGACCCTGC TGGCGCACGC GCTCAGCGTA
TTACGCCGCA TCCTGCCCGG CCGCTGTCTG GACTGGGTGT TACGCAGCAA CGGTTAA
 
Protein sequence
MQKAVLITGC SSGIGLIAAQ DLRNRGYRVL AACRKPQDVE NMRQLGLEGI ELDLDDSDSV 
ERAAAQVIEL TGGRLYGLFN NGGFGVYGPL SSISRQQLER QFATNLFGTH QLTQLLLPAM
LPHGEGRIIQ TSSVMGLVSS AGRGAYAASK FALEAWSDAL RMELHGTGIQ VSLIEPGPLT
THFTQNVNQA QSDKPVHNPG IAKRLTLPPE AILPKLRHAL ESPRAKLRYP VTLLAHALSV
LRRILPGRCL DWVLRSNG