Gene Spro_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1107 
Symbol 
ID5607230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1218122 
End bp1219897 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content59% 
IMG OID640936626 
Productputative multidrug transporter membraneATP-binding components 
Protein accessionYP_001477339 
Protein GI157369350 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.349072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000399844 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGACTAT TTGCTCAAAT CGGCTGGTAT TTCCGCCGCG AGTGGCGCCG CTACCTCGGG 
GCGGTGGTGC TGCTGATCAT CATTGCCATA CTGCAACTGT TGCCACCCAA GCTGGTGGGG
ATCATTGTGG ATGGCGTCAC CGAAAAACAG ATGTCCGGCG GCGTATTAAT GGCGTGGCTG
GGGCTGATGC TCGGCACTGC CGTGGTGGTC TACCTGCTGC GCTATGTGTG GCGGGTTCTG
CTGTTTGGTG CATCCTATCA GCTTGCCGTG GAGCTGCGTG AAAACTTCTA CCGCCAGCTT
AGCCGTCAGA ATCCGGCCTT CTATCTGCGC CACCGTACCG GCGATCTGAT GGCGCGCGCC
ACCAATGATG TCGACCGGGT GGTTTTCGCC GCCGGTGAAG GGGTGCTGAC GCTGGTGGAT
TCGCTGGTGA TGGGATTAGC GGTGCTGGTG GTGATGAGTA CCCAAATTAG CTGGCAGCTG
ACCCTGCTGT CGCTGATCCC CATGCCGATC ATGGCGATCG TCATCAAGTA CTACGGCGAC
CAGTTACACC AGCGTTTTAA ATCGGCGCAG GCGGCGTTCT CCAGCCTCAA CGATCAGGCG
CAGGAAAGCA TGACCAGTAT CCGCATGATC AAGGCGTTCG GGCTGGAAGA TCATCAGTCC
AATCAGTTTG CCGAAGTGGC CGCCCAGACC GGTGCCAAAA ACATGCACGT AGCGCGGGTG
GATGCCCGTT TCGACCCGAC GATTTATATC GCTATCGGTA CCGCCAATCT GCTGGCTATC
GGCGGCGGCA GTTGGATGGT GGTGAACGGT ACTCTGACAC TGGGCCAACT GACCAGCTTT
GTGATGTACC TCGGCCTGAT GATTTGGCCA ATGTTGGCGC TGGCCTGGAT GTTCAACATC
GTTGAACGTG GCAGCGCGGC CTATAGCCGT ATCCGCAGCC TGCTGGATGA AGCGCCGGCA
GTGACGGATG GCGATCAAGC CTTGCCGGCT GGGCGTGGCA ATCTGGCAAT CGACATTCGC
GCATTTCACT ATCCGGGCAA TACCCACCCG GCGCTGCATG ATGTGGTACT GAAGCTGGAG
CCGGGGCAAA TGCTCGGCCT GTGCGGCCCG ACCGGTGCCG GTAAATCGAC GCTGCTGTCA
CTGATCCAGC GCCAATTTGA TGTTGATGAC GGCCAGATCA GTTATCAGGG GCTGCCGCTG
ACCCAGGTGA AACTCGACGA CTGGCGTTCG CGGTTGTCCG TAGTCAGCCA GACACCGTTC
TTATTCTCAG ACAGCGTGGC AAACAACATC GCGCTCGGCA ACCCAGGGGC GACGCAGGAA
CAGATTGAGC GTGCGGCCCG CCTGGCCAGC GTGCACGAGG ATATTTTGCG CCTGCCGCAA
GGCTATGAAA CCGAGGTGGG CGAGCGTGGC GTGATGCTTT CCGGTGGTCA GAAACAGCGT
ATTTCCATCG CCCGCGCCCT GTTGCTGGAC GCGGAAATCC TGATCCTCGA CGACGCGCTA
TCGGCGGTGG ATGGCCGTAC CGAACACCAG ATCCTGCATA ACCTGCGCAG CTGGGGGCAA
AACCGCACGG TGATTATCAG CGCGCACCGG CTTTCGGCAT TGACCGAAGC CAGCGAGATT
TTGGTGATCC AGCACGGCGG CGTGGCTCAG CGTGGTGAAC ATGCGTCACT GGCGGCCCAA
CCGGGCTGGT ATCGCGATAT GTACCGCTAT CAGCAACTGG AAGCGGCGCT GGACGAGGCA
CCGGAAAGCG GCGAGGAGAT ACTAGCCAAT GAATAA
 
Protein sequence
MRLFAQIGWY FRREWRRYLG AVVLLIIIAI LQLLPPKLVG IIVDGVTEKQ MSGGVLMAWL 
GLMLGTAVVV YLLRYVWRVL LFGASYQLAV ELRENFYRQL SRQNPAFYLR HRTGDLMARA
TNDVDRVVFA AGEGVLTLVD SLVMGLAVLV VMSTQISWQL TLLSLIPMPI MAIVIKYYGD
QLHQRFKSAQ AAFSSLNDQA QESMTSIRMI KAFGLEDHQS NQFAEVAAQT GAKNMHVARV
DARFDPTIYI AIGTANLLAI GGGSWMVVNG TLTLGQLTSF VMYLGLMIWP MLALAWMFNI
VERGSAAYSR IRSLLDEAPA VTDGDQALPA GRGNLAIDIR AFHYPGNTHP ALHDVVLKLE
PGQMLGLCGP TGAGKSTLLS LIQRQFDVDD GQISYQGLPL TQVKLDDWRS RLSVVSQTPF
LFSDSVANNI ALGNPGATQE QIERAARLAS VHEDILRLPQ GYETEVGERG VMLSGGQKQR
ISIARALLLD AEILILDDAL SAVDGRTEHQ ILHNLRSWGQ NRTVIISAHR LSALTEASEI
LVIQHGGVAQ RGEHASLAAQ PGWYRDMYRY QQLEAALDEA PESGEEILAN E