| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1082 |
|---|
| Symbol | |
|---|
| ID | 5606832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1190536 |
|---|
| End bp | 1191126 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640936601 |
|---|
| Product | DJ-1 family protein |
|---|
| Protein accession | YP_001477314 |
|---|
| Protein GI | 157369325 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01383] DJ-1 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000871553 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAT CGGCGCTGGT CTGCCTGGCA CCTGGTAGCG AAGAAATCGA AGCCGTCACC
ACCATTGATC TGCTGGTGCG GGCGGGCGTT AAAGTGACTA CCGCCAGCGT AGCGGGCGAT
GGCGACCTGA CCATCGTCTG TTCACGCGGG GTAAAACTGC TGGCCGATGC ACCACTGGTG
TCGATTGTGG ACGAGCCTTT CGACGCCATA GTGCTGCCCG GTGGCCTGAA AGGTGCCGAG
TGCTTCCGCG ACAGCCCGCT GCTGGTGGAG AAAGTGCGTC AGATGCACCT GCAGGGCAAT
ATTGTCGCCG CCATCTGCGC AGCACCGGCG CTGGTGCTGC AACACCACGA TCTGTTCCCC
ATTGGCAATA TGACCGGGTT CCCGGGGCTG AAAGAACAGA TCCCGGCCGA CCAATGGATA
GAAAAACGTG TGGTGTTCGA TCCGCGCGTT AACCTGCTCA CCAGCCAGGG GCCGGGAACT
TCAATGGAGT TTGCGCTGAA GCTGATTGAT TTGCTGCTGG GGAAAGCCAA AGCGGCGGAG
ATCGCCGCTC AGCTGGTATT GATACCTGGA ATGTACGACT TCCGCGATTA A
|
|---|
| Protein sequence | MSVSALVCLA PGSEEIEAVT TIDLLVRAGV KVTTASVAGD GDLTIVCSRG VKLLADAPLV
SIVDEPFDAI VLPGGLKGAE CFRDSPLLVE KVRQMHLQGN IVAAICAAPA LVLQHHDLFP
IGNMTGFPGL KEQIPADQWI EKRVVFDPRV NLLTSQGPGT SMEFALKLID LLLGKAKAAE
IAAQLVLIPG MYDFRD
|
|---|
| |