Gene Spro_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1080 
Symbol 
ID5606830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1188557 
End bp1188820 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content55% 
IMG OID640936599 
Productexodeoxyribonuclease VII small subunit 
Protein accessionYP_001477312 
Protein GI157369323 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000691643 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAAAA AACCTGCACA ATCAGACAGT ACAGAGCAAA GCGTCAGCTT TGAAAGCTCC 
CTTAGCGAGT TGGAAAGCAT CGTCACGCGT CTGGAATCGG GTGAGTTACC GCTGGAAGAC
GCGCTCAATG AGTTCGAACG CGGCGTACAG TTGGCACGCC AGGGCCAGCA GAAACTGCAG
CAGGCGGAGC AACGCGTACA AATTTTGCTT AACGACAGCG CCGATGATGC GGCGCTGACG
CCTTTCACAC CGGATGCCGA GTAA
 
Protein sequence
MPKKPAQSDS TEQSVSFESS LSELESIVTR LESGELPLED ALNEFERGVQ LARQGQQKLQ 
QAEQRVQILL NDSADDAALT PFTPDAE