Gene Spro_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1071 
SymbolnrdR 
ID5606849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand+ 
Start bp1180477 
End bp1180926 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content55% 
IMG OID640936590 
Producttranscriptional regulator NrdR 
Protein accessionYP_001477303 
Protein GI157369314 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.472866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0011429 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTGCC CTTTCTGCGC CGCCGTTGAT ACCAAAGTCA TTGATTCCCG CCTGGTGGGT 
GATGGTTCGC AGGTGCGCCG TCGCCGCCAA TGTTTGGTTT GTAATGAACG CTTCACCACC 
TTTGAAGTGG CTGAACTGGT GATGCCACGG GTAATCAAAA GCGATGAAGT GCGTGAGCCA 
TTCAACGAAG ACAAGCTGCG TCGCGGCATG CTGAAGGCGT TGGAAAAACG CCCGGTCAGC 
TCCGACGACG TGGAGAACGC GATCAACCAC ATTAAATCCC AGTTGCGCGC CACCGGCGAG 
CGTGAAGTCC CGACCAAACT GGTCGGTAAC CTGGTGATGG ACGCGCTGAA AAAGTTGGAT 
AAAGTGGCCT ATATTCGCTT TGCCTCGGTT TACCGCAGCT TTGAAGATAT CCGCGAATTC 
GGCGAAGAGA TCGCCCGTCT GCAGGACTAA
 
Protein sequence
MHCPFCAAVD TKVIDSRLVG DGSQVRRRRQ CLVCNERFTT FEVAELVMPR VIKSDEVREP 
FNEDKLRRGM LKALEKRPVS SDDVENAINH IKSQLRATGE REVPTKLVGN LVMDALKKLD 
KVAYIRFASV YRSFEDIREF GEEIARLQD