| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1029 |
|---|
| Symbol | |
|---|
| ID | 5606499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1131121 |
|---|
| End bp | 1132641 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640936548 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001477261 |
|---|
| Protein GI | 157369272 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.724261 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA CCCCGATTCT GGAAATGCAC AACATCGCCA AGAGTTTTGG TCAGTTTTAC
GCGCTGAAGG GCGTCAACCT GACGGTTTAT AGCGGTGAGA TCCATGCGCT GATGGGTGAA
AACGGCGCGG GTAAAAGCAC CTTAATGAAA ATATTGGCCG GCGCTTATAT CGCCAGCAGC
GGGGAAATTT TTATCGATGG GCAGCCGTTT GCCATTAAAG GGCCAAAAGA TGCCCTGGCG
GCGGGTATCA CGCTGATTTA CCAGGAAATG AATCTGGCAC CGAATCTGAC GGTGGCGGAG
AACATTTTTC TGGGCAGCGA GATCCAGCGC GGCGGCCTGG TGAAGCGCCA GCAGATGTTG
CTGGAAGCAC AGAAAGTCAT TGATCGTTTG GGCGCGCAGT TCAGCGCCGG CGATCGGGTG
ATGAAATTAA CCATTGCCGA ACAGCAGCAG GTGGAAATCG CCCGCGCGTT GCACCGCAAC
AGCCGCATCC TGGTGATGGA CGAACCGACG GCGGCACTTT CTTCGCGTGA GACGCATCGG
CTGTTTGAGT TGATCAAGCG TCTGCGCGAT GAGGGGATGG CGATCATTTA CATCAGCCAT
CGCATGGCGG AAGTCTACGA GCTGTCGGAT CGCGTTAGCG TGCTGCGCGA CGGCCAGTAC
GTTGGCAGCC TGATGCGCGA CAAACTGTCC GCCAGTGAAT TGGTACGCAT GATGGTGGGC
CGCCCGTTGA GCGATCTGTT CAACAAGGAG CAGGGCATTG CGGTGGGCGA ACCGCGCCTG
ACGCTGCATG GCCTGACCGA CGGCAAGAAA GTAAAGCCGG TCAGCCTGCA GGTGCGTGCC
GGTGAGATCG TCGGCCTTGC CGGGCTGGTG GGCGCCGGCC GTTCCGAACT GGCGCAGCTG
ATTTTCGGCG TGCGCAAGTC CAGCGGCGGT ACGGTGGAAA TTGACGGTAA GCCGGTCAAT
ATCCGTTCAC CGCGTGACGC CATTGCGCTG GGCATCGGTT TTCTCACCGA AAACCGCAAA
GAGCAGGGCC TGTTTCTCGA TCTGGCAGCG CATGAAAATA TCGTGATGGC GACGCTGGAG
CGTGACGGCC GTTATGGCCT GCTGAATCGG CGTAAGGCTC AGAGTATTTC CAGCGACGCC
ATCGGCCTGC TGAATATCCG CGTGCCGCAT GCTCAGGTGC GGGCCGGTGG GTTGTCCGGC
GGCAACCAAC AGAAGCTGCT GATTTCACGC TGGGTGGCGA TCGGCCCGCG TATTCTGATC
CTCGATGAGC CCACTCGCGG CGTTGACGTG GGTGCCAAAA GCGAAATTTA TCGCATCATG
AGTCAGATGG CGCAGCAGGG AGTGGCGATC CTGATGATCT CCAGTGAACT GCCCGAGGTG
GTTGGCATGA GTGACCGGGT TTATGTGATG CACGAAGGCA GTATTGCCGG GGAATTGAGC
GGCACCGAGA TCAGCCAGGA GAGCATCATG ACGCTGGCCA CCGGCGTCGA ACCCGCCCTG
GAGGCGGCCA GCCATGAATA A
|
|---|
| Protein sequence | MSATPILEMH NIAKSFGQFY ALKGVNLTVY SGEIHALMGE NGAGKSTLMK ILAGAYIASS
GEIFIDGQPF AIKGPKDALA AGITLIYQEM NLAPNLTVAE NIFLGSEIQR GGLVKRQQML
LEAQKVIDRL GAQFSAGDRV MKLTIAEQQQ VEIARALHRN SRILVMDEPT AALSSRETHR
LFELIKRLRD EGMAIIYISH RMAEVYELSD RVSVLRDGQY VGSLMRDKLS ASELVRMMVG
RPLSDLFNKE QGIAVGEPRL TLHGLTDGKK VKPVSLQVRA GEIVGLAGLV GAGRSELAQL
IFGVRKSSGG TVEIDGKPVN IRSPRDAIAL GIGFLTENRK EQGLFLDLAA HENIVMATLE
RDGRYGLLNR RKAQSISSDA IGLLNIRVPH AQVRAGGLSG GNQQKLLISR WVAIGPRILI
LDEPTRGVDV GAKSEIYRIM SQMAQQGVAI LMISSELPEV VGMSDRVYVM HEGSIAGELS
GTEISQESIM TLATGVEPAL EAASHE
|
|---|
| |