| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0992 |
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| Symbol | |
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| ID | 5605833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 1096106 |
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| End bp | 1097782 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640936511 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001477224 |
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| Protein GI | 157369235 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA CTATTGGAGC CTTTATCCTG CAACAGCTCC GCACCCTGAA CATCGATCGT
ATTTATGGCG TACCCGGCGA CTATAATCTG GCGCTGCTGG AACTGATTGA ACAGGATGAC
AAGCTGGAGT TCATTGGCAA CTGTAATGAA CTCAATGCCT CCTACGCAGC CGATGGCTAT
GCACGGCTAA AAGGCGCCGG AGCGCTAATC ACTACCTATG GCGTCGGCGA CCTGGCCGCA
CTGTCCGGCA TTGCCGGTGC CTACGCCGAA TCGGCCCCGG TGGTCTGCCT GTCCGGTACC
CCGCCGCTGC ATGCCATGAA AAATCACCTG CTGCTGCACC ACACGCTGGC GGACGGTAAC
TTTGATAACG TGATGAACTG TTTTAAACAA TTCACCGTCG CCCAGGCATT AATTACGCCG
GAAAATGCGG CAGTGGAAAT TCCCCGCGTT ATTTCCCGCG CCTGGACGGA AAAGAAACCG
GTTTATTTGC AATTACCTTC TGATATTTGT GATGTAGAAA TTGAAATCAC TCAGGCGGTG
GCACCACCGC AATTACCCGC CAGCGACAAA TATAATGTTC AACTGGCGGC AATGGCGTTG
CTTGCGCGGC TAAAACTGGC AAAAAAACCG ATTATTCTGG TCGACCAAAT GGTGGACCGC
TTTCAGCTAC AACAATTAGT GATCGACGTG GCGCATAAAT TCGCCATCCC GCTCACCAAC
ATGCCGACGG CCAAATGCAT TATTCCAGAA ACCACGCCGG GCTGGATCGG CGGTTACAGC
GGTAATCTGT CACGCCCCGA ACTCTATGAA CACATGGCGC ACTCAGACTG CGTGCTGAGC
TTCGGCGTAC GGTTGGTGGA CTCCACCACC GGCTATTTCT CGCATCGCAT CCCGTCCGAC
GCGCAAATCG ATATTCAGCC GTTTTCAGTG AAGCTGGGAG AAACTTCTTA TCCGGCAGTG
GCGACGGCAG ACCTGCTACA GGCGCTGCTG GCATTGGGTG AAGGCGTGGC AGATCATCAG
CCGGCCGTAC TACCCGAAGC GCGCCATCGG CTGGCGACGC CGAGCGAAAC CCCAATCGAT
CAGGCTTATT TATGGCAGCG CCTGCAACGC TTTATTCGGG CCGATGACGT GCTGGTGGTA
GAGAACGGCA CCTCGGGCGC GGCGATTGGC GGCATGCGGA TGCCGGACGG CGTCCAGGTG
GTCAATCAGC CGATTTGGGG CTCGATCGGT TATACCTTAC CGGCGCTGCT GGGCACCATG
ATGGCCGCCC CGGAACGGCG GCACCTGCTG TTTATTGGCG ATGGCTCGTT CCAGCTTACC
GCGCAGGAAG TTTCCACCCT GCTGCGTTAC GATCAGAAGC CGATTATCTT CCTGATTAAT
AACGACGGTT ACACCATCGA GCGTTACATT CTCGGCGAAA ATTCGTCATA CAACGATATT
GGGCCGTGGG ACTACGCCAA GCTGCCTGCC GTGCTCAACA CCCAGGCGAC ACCGTTTTGC
GTGGCGGTAG AAACCACCCA ACAGCTGGAG TTGGCGCTCG AGCACGCCTC ACGACAGGAT
CAATTGACCT TTATCGAAAT AAAGGTGCCG ATGATGGACA CACCGCCGGT GATGAAGGAG
TTCTGCAACC GCTGCAATAA CTTTAACTTC GGCCTGACTA ACCCGCGCCG CGCTTAG
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| Protein sequence | MKITIGAFIL QQLRTLNIDR IYGVPGDYNL ALLELIEQDD KLEFIGNCNE LNASYAADGY
ARLKGAGALI TTYGVGDLAA LSGIAGAYAE SAPVVCLSGT PPLHAMKNHL LLHHTLADGN
FDNVMNCFKQ FTVAQALITP ENAAVEIPRV ISRAWTEKKP VYLQLPSDIC DVEIEITQAV
APPQLPASDK YNVQLAAMAL LARLKLAKKP IILVDQMVDR FQLQQLVIDV AHKFAIPLTN
MPTAKCIIPE TTPGWIGGYS GNLSRPELYE HMAHSDCVLS FGVRLVDSTT GYFSHRIPSD
AQIDIQPFSV KLGETSYPAV ATADLLQALL ALGEGVADHQ PAVLPEARHR LATPSETPID
QAYLWQRLQR FIRADDVLVV ENGTSGAAIG GMRMPDGVQV VNQPIWGSIG YTLPALLGTM
MAAPERRHLL FIGDGSFQLT AQEVSTLLRY DQKPIIFLIN NDGYTIERYI LGENSSYNDI
GPWDYAKLPA VLNTQATPFC VAVETTQQLE LALEHASRQD QLTFIEIKVP MMDTPPVMKE
FCNRCNNFNF GLTNPRRA
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