Gene Spro_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0942 
Symbol 
ID5605019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1040588 
End bp1041208 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content56% 
IMG OID640936463 
Productmethylthioribulose-1-phosphate dehydratase 
Protein accessionYP_001477176 
Protein GI157369187 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR03328] methylthioribulose-1-phosphate dehydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATGA CAGAAAATCA GCAACTTAAA GCGTTATTGT CGGCCTGTCA CTGGATTGGT 
GAAAAGGGCT GGTGCCCGGC GACCGGTGGC AATATGTCGC TGCGTCTCGA TGACCAACAT
TGTCTGGTCA CCGAATCCGG CAAGGATAAG GGCAGCCTGA CTGAAACTGA CTTCCTGCTG
GTGGAAACCG CCAGCAACCA TGTGCCGAGC GGCCGCACGC CATCAGCGGA AACCGGTCTG
CATACCCTTA TTTACCGTTT GTACCCGCAG ATTGGCGCGG TACTGCATAC TCATTCGGTG
AATGCGACCG TGCTGTCGCG GGTTGAACGC AGCGATGGGC TGGTGTTGCA GGGCTATGAG
ATGCAAAAAT CACTCGGTGG GCAGACTACG CATCTGGACA GCGTGGTGAT CCCGATTTTC
GATAACGATC AGGATATCTC GCGATTAGCG GCGCGGGTGG CAGCCCATGC CGAAGCCACG
CCGTTGCAGT ACGGTTTTCT GGTGCGTGGC CACGGTCTGT ATTGCTGGGG TCGCCAGGTC
GCGGAAGCTC GTCGTCATCT TGAAGGGCTG GAATTCCTGT TCCAGTGCGA ACTGCAACGC
CGTTTACTGG AGGCCAAATG A
 
Protein sequence
MLMTENQQLK ALLSACHWIG EKGWCPATGG NMSLRLDDQH CLVTESGKDK GSLTETDFLL 
VETASNHVPS GRTPSAETGL HTLIYRLYPQ IGAVLHTHSV NATVLSRVER SDGLVLQGYE
MQKSLGGQTT HLDSVVIPIF DNDQDISRLA ARVAAHAEAT PLQYGFLVRG HGLYCWGRQV
AEARRHLEGL EFLFQCELQR RLLEAK