Gene Spro_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0936 
Symbol 
ID5604971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1035141 
End bp1036382 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content59% 
IMG OID640936457 
Productaminotransferase class V 
Protein accessionYP_001477170 
Protein GI157369181 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.26669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATA TCACCCAATT CGATCAGATT AATCCACCCG CCCGCCTGTT GATGGGGCCG 
GGGCCGATCA ACGCGGATCC GCGCGTGCTG CGTGCCATGT CGAGCCAGTT GATTGGTCAG
TACGATCCGG CGATGACTGG TTACATGAAT CAGGTCATGG AACTGTACCG CGCATTGTTC
CGCACCGAAA ACCGCTGGAC CCTGCTGGTG GACGGCACTT CTCGCTCCGG TATTGAAGCG
ATGCTGGTCT CTTCCATTCG TCCAGGTGAC AAGGTGCTGG TGCCGGTATT TGGTCGTTTT
GGCCATCTAT TGTGTGAGAT AGCCCGCCGC TGCCGCGCCG AAGTCCACAC CATCGAGGTG
CCCTGGGGCG AAGTATTCAG TGCCGACCAG ATTGAAGACG CCATTAAGAA AGTACGCCCG
CGCCTGCTGT TGACGGTGCA AGGCGATACC TCAACCACCA TGCTGCAGCC GCTGGATCAA
CTGGGTGATA TCTGCCGCCG TCACGGCGTG CTGTTTTACA CCGATGCCAC CGCTTCCTTT
GGCGGTAACC CGCTGGAAAC CGACGCCTGG GGGCTGGATG CGGTCTCCGC CGGTCTGCAG
AAATGCCTGG GCGGCCCATC GGGCAGTTCG CCGGTCACGC TCAGCCCGCA GTTTGAAGAG
ATTGTCCGCC GTCGCAAATG CGTGGAGCAG GGTATTCGCA CCCTCGATCA CGCCGATGGT
GAGGACGAGA TGATCTACTC CAACTATTTC GATCTCGGCA TGATCATGGA TTACTGGGGC
CCGGAGCGCC TGAACCACCA TACCGAAGCC ACCAGCATGC TGTTTGCCGC GCGCGAGTGC
GCCAGGGTTA TTCTGGAAGA AGGGCTGGAT AACGCCATCG CCCGGCATAA GCTGCACGGT
GCGGCCATGC TGGCCGGCAT TCAGGGCATG GGGCTGGAAG TCTTCGGCGA TTTGGATAAC
CGAATGAATA ACGTGCTCGG CGTGGTGATC CCGCAGCAGG TTCATGGCGA GCAGGTACGC
CAGATGATGC TGAACGACTT CGCCATTGAG ATCGGCACTT CGTTCGGTCC GCTACAGGGA
AAAATCTGGC GCATCGGCAC CATGGGCTAT AACGCGCGTA AAGACTGCGT ACTGCAGACG
CTGACTGCAC TGGAGGCGGT GTTGAACCGG TTGGGTTTCG CCAGCAAACA GGGCGAAGCG
CTGCAGGCGG CATGGAATAC TTACGACGAC GGCAGCCGTT GA
 
Protein sequence
MLDITQFDQI NPPARLLMGP GPINADPRVL RAMSSQLIGQ YDPAMTGYMN QVMELYRALF 
RTENRWTLLV DGTSRSGIEA MLVSSIRPGD KVLVPVFGRF GHLLCEIARR CRAEVHTIEV
PWGEVFSADQ IEDAIKKVRP RLLLTVQGDT STTMLQPLDQ LGDICRRHGV LFYTDATASF
GGNPLETDAW GLDAVSAGLQ KCLGGPSGSS PVTLSPQFEE IVRRRKCVEQ GIRTLDHADG
EDEMIYSNYF DLGMIMDYWG PERLNHHTEA TSMLFAAREC ARVILEEGLD NAIARHKLHG
AAMLAGIQGM GLEVFGDLDN RMNNVLGVVI PQQVHGEQVR QMMLNDFAIE IGTSFGPLQG
KIWRIGTMGY NARKDCVLQT LTALEAVLNR LGFASKQGEA LQAAWNTYDD GSR