Gene Spro_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0916 
Symbol 
ID5604305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1015058 
End bp1015996 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content54% 
IMG OID640936437 
Productchitin deacetylase 
Protein accessionYP_001477150 
Protein GI157369161 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID[TIGR03212] putative urate catabolism protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGT TCCAGTTCAA TCAAGATTAT CCCCGAGATT TAATCGGCTA CGGTGGTCGT 
CCGCCGCACG CTGGTTGGCC TGGTCAGGCG CGAATCGCGG TGCAGTTTGT TCTCAACTAC
GAAGAGGGCG CGGAAAATAA CGTGCTGCAC GGCGACGCCG GTTCGGAACA ATTTCTTTCC
GATATCATTG GTGCTGCCAG TTATCCCGAA CGGCATATGT CGATGGATTC CTTGTACGAA
TATGGTTCAC GTGCTGGTTT CTGGCGCATT CATAATGAGT TTCAGCGCCG TGGTCTGCCG
TTGACGGTGT TTGGCGTGGC AATGGCACTG GCGCGTAATC CGTTGGTGGT TGAAGCGATT
AAAAACGCCG ATTACGACGT AGTCAGCCAT GGTTGGCGCT GGATCCACTA TCAACATATG
GATGAAGCGA CCGAACGGCA GCATATGCAG CAGGCCATCA CAGTACTACG CGATCTGTTC
GGCAAGGCAC CGCTCGGCTG GTATACCGGT CGCGATAGCC CGAATACTCG TCGGTTGGTG
GTGGAACAAG GAGGTTTACT GTACGACAGC GACTATTACG GCGACGACCT GCCGTTCTGG
ACCGAGGTGC AGTGCGCCAA TGGCCAGAAG AAACCGCATT TGATCGTGCC TTATACGTTA
GAAGCTAATG ACATGCGTTT CGCTTCGCCG CAGGGGTTTA ACACCGGCGA GCAGTTCTTT
ACCTATCTTA AAGACAGTTT TGACGTGCTG TATGCCGAAG GGGCAGAGTC GCCGAAGATG
CTGTCGATCG GCATGCATTG TCGCTTGCTG GGGCGTCCTG GCAAGTTTCG CGCATTGCAG
CGCTTTCTGG ATTATATCGA GCAACACGAT CGGGTTTGGG TATGCCGGCG GCAGGATATC
GCCGAGCACT GGGTCGCGCA GCACCCGTTC AAGAAATGA
 
Protein sequence
MGEFQFNQDY PRDLIGYGGR PPHAGWPGQA RIAVQFVLNY EEGAENNVLH GDAGSEQFLS 
DIIGAASYPE RHMSMDSLYE YGSRAGFWRI HNEFQRRGLP LTVFGVAMAL ARNPLVVEAI
KNADYDVVSH GWRWIHYQHM DEATERQHMQ QAITVLRDLF GKAPLGWYTG RDSPNTRRLV
VEQGGLLYDS DYYGDDLPFW TEVQCANGQK KPHLIVPYTL EANDMRFASP QGFNTGEQFF
TYLKDSFDVL YAEGAESPKM LSIGMHCRLL GRPGKFRALQ RFLDYIEQHD RVWVCRRQDI
AEHWVAQHPF KK