| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0905 |
|---|
| Symbol | |
|---|
| ID | 5603648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 1004125 |
|---|
| End bp | 1005012 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640936425 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001477139 |
|---|
| Protein GI | 157369150 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCGA ACTCTGATGA GTTAATTACC TTCGTCACCG TGGTGGAAAG CGGTAGCTTC
AGCCGGGCAG CAGAACAACT TGATCAGGCC AATTCGGTGG TCAGCCGCAC GGTCAAGAAG
CTGGAGGCCA AGTTGGGCGT AACGTTACTC AACCGCACTA CGCGCCAGAT CAGTCTGACG
CAGGAAGGGG AAAACTATTT CCGTCAGGTA CAGAAGGTAC TGAGTGATAT GGCTGCGGCA
GAGAATGCGC TGATGGAAAG CCGTCAGCGT CCGCAGGGGC TACTACGCGT CGATGCCGCC
ACCCCGGTGG TGCTGCACGT ATTGACCCCG CTGGTGGCGG AATTTCGGGC ACTGTATCCG
GAAATGTCGT TGTCGCTGGT GTCGTCGGAG AACTTTATCA ATCTGATTGA GCGCAAGGTG
GATATCGCCA TTCGCGTCGG TGAGCTGACC GACTCCAGCC TCAAGGCGCG CAAGCTGATG
ACCAGCTACC GGCGTGTGCT GGCCTCCCCC GCCTATTTGG CACAGTACGG TACGCCGCAA
AAGGTAGAAG AATTAGAGCA GCATAGCTGC ATTGGTTTTA ACGATTTGCC CAGCCTCAAC
CGCTGGCCAC TGGCCTGTGC TGATGGCCGC CAGTTGGAAA TTACACCTGG CCTGACCACC
AACAGTGGGG AAACCCAGCG TCATCTGTGT CTGCACGGCA ACGGTATTGC CTGCCTGTCG
AATTTTATGA TTGATGCCGA TATCGAGCGC GGCGATCTGG TGCCGATTTT GGTTGAAGAA
ACCCTGCCGG TAGCAATGCC CGTTAACGCG GTGTATTACA GCGACAGTGC AGTCAGCAAT
CGCCTGCGCA GCTTTATCGA TTTTATCAGT GAGCGATTGG CGCAATAA
|
|---|
| Protein sequence | MKANSDELIT FVTVVESGSF SRAAEQLDQA NSVVSRTVKK LEAKLGVTLL NRTTRQISLT
QEGENYFRQV QKVLSDMAAA ENALMESRQR PQGLLRVDAA TPVVLHVLTP LVAEFRALYP
EMSLSLVSSE NFINLIERKV DIAIRVGELT DSSLKARKLM TSYRRVLASP AYLAQYGTPQ
KVEELEQHSC IGFNDLPSLN RWPLACADGR QLEITPGLTT NSGETQRHLC LHGNGIACLS
NFMIDADIER GDLVPILVEE TLPVAMPVNA VYYSDSAVSN RLRSFIDFIS ERLAQ
|
|---|
| |