Gene Spro_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0871 
Symbol 
ID5602651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp966651 
End bp967163 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content60% 
IMG OID640936386 
Productglycoside hydrolase family protein 
Protein accessionYP_001477105 
Protein GI157369116 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.718049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.102143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCAC TCGCTAAACG CTGCAGCGTG GCGGCTATTC TGGCCCTCGC CGCCCTGCTG 
CCACAGTTCA ATACCCTACA CACCTCTGAA CAGGGATTGC GCCTGATTGC CGATTTCGAA
GGCTGCAGAC TCTCCCCCTA CCAGTGCAGT GCCGGGATAT GGACCAACGG CATCGGCCAT
ACCGCCGGTG TGAAATCCGG CTCCGTCATC AACGAACGTC AGGCAGCGGC CAATCTGATC
GAGGATGTCC GCACCGTCGA ACACGGCATC GCACGCTGCA TGGCCGTAGA GATGCCGCAG
CCGGTTTACG ACGCAGTCAG CGCCTTTGCC TTCAACGTTG GCGTCAGCGC TGCCTGCAAT
TCCACATTGG CCACCTTTAT CAAACGCCAA CAATGGCAGG CGGCTTGCGA TCAGCTACCG
CGCTGGATCT ATGTCAAGGG CGTTAAAAGC CAGGGGCTGG AGCGCCGTCG TCATGCCGAA
CGTGCTCTGT GCCTGCAGGG TATTCAGCGC TGA
 
Protein sequence
MSSLAKRCSV AAILALAALL PQFNTLHTSE QGLRLIADFE GCRLSPYQCS AGIWTNGIGH 
TAGVKSGSVI NERQAAANLI EDVRTVEHGI ARCMAVEMPQ PVYDAVSAFA FNVGVSAACN
STLATFIKRQ QWQAACDQLP RWIYVKGVKS QGLERRRHAE RALCLQGIQR