Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0832 |
Symbol | |
ID | 5602886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 925441 |
End bp | 926439 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640936343 |
Product | RNA polymerase sigma factor RpoS |
Protein accession | YP_001477066 |
Protein GI | 157369077 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0423608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA ATACGCTGAA AGTTAACGAG TTACATGACG ATGCGGATTT CGACGAGAAC GCAACGGAAG CGGAATCATT CGACGAAAAA GCACTGGTTG AAGAAGAGGC CAGTGAGAGT GATTTAGCGG AAGAAGAGTT GTTGTCACAA GGCGTGACCC AACGCGTATT GGATGCGACG CAGCTCTATC TTGGCGAAAT CGGTTATTCT CCGCTGCTGA CCGCAGAGGA AGAAGTTTAT TTTGCGCGGC GTGCACTGCG CGGTGACGTG CCGTCCCGCC GCCGAATGAT TGAAAGTAAC CTGCGGTTGG TGGTGAAAAT CGCCCGCCGT TACAGCAATC GCGGCCTGGC GCTGCTGGAT CTGATTGAAG AGGGTAACCT CGGTCTGATC CGCGCAGTGG AAAAGTTTGA CCCAGAACGC GGTTTCCGTT TCTCGACTTA CGCAACCTGG TGGATCCGGC AGACGATTGA ACGGGCGATC ATGAACCAAA CCCGTACTAT CCGCTTGCCT ATCCACATTG TTAAAGAACT GAATGTCTAT TTGCGCACCG CGCGCGAGCT TTCTCATAAA CTGGATCATG AACCGAGCGC TGAAGAGATT GCAGAGCAAC TCGACAAGCC GGTCGATGAC GTCAGCCGTA TGCTGCGCCT GAATGAACGT ATCACTTCTG TCGATACGCC ATTGGGTGGG GATTCGGAGA AAGCCTTGCT GGACATTCTG GCCGACGAGA AAGACAACGG ACCAGAAGAC ACCACGCAAG ACGATGACAT GAAACAGAGC ATCGTTAAAT GGTTGTTCGA ACTGAACGCC AAACAGCGTG AAGTGCTGGC GCGTCGTTTT GGCCTGCTGG GCTACGAAGC GGCAACGCTT GAAGATGTGG GTCGTGAAAT TGGCCTGACT CGCGAGCGAG TACGTCAGAT CCAGGTTGAA GGTTTACGCC GTCTGCGTGA AATTCTGCAA ATGCAGGGCC TGAGCATTGA GGCACTGTTC CGCGAGTAA
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Protein sequence | MSQNTLKVNE LHDDADFDEN ATEAESFDEK ALVEEEASES DLAEEELLSQ GVTQRVLDAT QLYLGEIGYS PLLTAEEEVY FARRALRGDV PSRRRMIESN LRLVVKIARR YSNRGLALLD LIEEGNLGLI RAVEKFDPER GFRFSTYATW WIRQTIERAI MNQTRTIRLP IHIVKELNVY LRTARELSHK LDHEPSAEEI AEQLDKPVDD VSRMLRLNER ITSVDTPLGG DSEKALLDIL ADEKDNGPED TTQDDDMKQS IVKWLFELNA KQREVLARRF GLLGYEAATL EDVGREIGLT RERVRQIQVE GLRRLREILQ MQGLSIEALF RE
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