Gene Spro_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0832 
Symbol 
ID5602886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp925441 
End bp926439 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content53% 
IMG OID640936343 
ProductRNA polymerase sigma factor RpoS 
Protein accessionYP_001477066 
Protein GI157369077 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0423608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA ATACGCTGAA AGTTAACGAG TTACATGACG ATGCGGATTT CGACGAGAAC 
GCAACGGAAG CGGAATCATT CGACGAAAAA GCACTGGTTG AAGAAGAGGC CAGTGAGAGT
GATTTAGCGG AAGAAGAGTT GTTGTCACAA GGCGTGACCC AACGCGTATT GGATGCGACG
CAGCTCTATC TTGGCGAAAT CGGTTATTCT CCGCTGCTGA CCGCAGAGGA AGAAGTTTAT
TTTGCGCGGC GTGCACTGCG CGGTGACGTG CCGTCCCGCC GCCGAATGAT TGAAAGTAAC
CTGCGGTTGG TGGTGAAAAT CGCCCGCCGT TACAGCAATC GCGGCCTGGC GCTGCTGGAT
CTGATTGAAG AGGGTAACCT CGGTCTGATC CGCGCAGTGG AAAAGTTTGA CCCAGAACGC
GGTTTCCGTT TCTCGACTTA CGCAACCTGG TGGATCCGGC AGACGATTGA ACGGGCGATC
ATGAACCAAA CCCGTACTAT CCGCTTGCCT ATCCACATTG TTAAAGAACT GAATGTCTAT
TTGCGCACCG CGCGCGAGCT TTCTCATAAA CTGGATCATG AACCGAGCGC TGAAGAGATT
GCAGAGCAAC TCGACAAGCC GGTCGATGAC GTCAGCCGTA TGCTGCGCCT GAATGAACGT
ATCACTTCTG TCGATACGCC ATTGGGTGGG GATTCGGAGA AAGCCTTGCT GGACATTCTG
GCCGACGAGA AAGACAACGG ACCAGAAGAC ACCACGCAAG ACGATGACAT GAAACAGAGC
ATCGTTAAAT GGTTGTTCGA ACTGAACGCC AAACAGCGTG AAGTGCTGGC GCGTCGTTTT
GGCCTGCTGG GCTACGAAGC GGCAACGCTT GAAGATGTGG GTCGTGAAAT TGGCCTGACT
CGCGAGCGAG TACGTCAGAT CCAGGTTGAA GGTTTACGCC GTCTGCGTGA AATTCTGCAA
ATGCAGGGCC TGAGCATTGA GGCACTGTTC CGCGAGTAA
 
Protein sequence
MSQNTLKVNE LHDDADFDEN ATEAESFDEK ALVEEEASES DLAEEELLSQ GVTQRVLDAT 
QLYLGEIGYS PLLTAEEEVY FARRALRGDV PSRRRMIESN LRLVVKIARR YSNRGLALLD
LIEEGNLGLI RAVEKFDPER GFRFSTYATW WIRQTIERAI MNQTRTIRLP IHIVKELNVY
LRTARELSHK LDHEPSAEEI AEQLDKPVDD VSRMLRLNER ITSVDTPLGG DSEKALLDIL
ADEKDNGPED TTQDDDMKQS IVKWLFELNA KQREVLARRF GLLGYEAATL EDVGREIGLT
RERVRQIQVE GLRRLREILQ MQGLSIEALF RE