| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0831 |
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| Symbol | nlpD |
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| ID | 5602885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 924401 |
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| End bp | 925387 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640936342 |
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| Product | lipoprotein NlpD |
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| Protein accession | YP_001477065 |
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| Protein GI | 157369076 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0680895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTACAT TACGCCGGGT TGCGGTGTGT ACGATGGTAA GTTTGTGGTT GGCAGGTTGT
ACGAACACTG AATCGACATC GGCCCCTATT AGTAGCGTGG ACGGTGGCGG AGCCGCCGCA
TCCAGCAACG CTGGAGCGCA GGCTAACGCT GAAGGGCACA TTGTTTACAA CCGCAGTTAC
ACTTCGATCC CCAAAGGGAG CTACAGCGGC AATACCTACA CGGTTAAGCG CGGAGACACG
CTGTTTTACA TCGCCTGGAT CACCGGAAAC GATTACCGTG ACCTGGCCCA GCGCAACAAT
ATCCCTGAGC CATACAGCCT GAATGTGGGC CAAAGCATTC AGCTTGGTAA TGGTTCCGCC
AACGGAAACG GCGGTATGCT GGCGGCAACA GACGCGACCA GCGGCGGTGT TCCTAAGCCA
CCATCGACCT CTCAGATACA AACTGCAACG GTTGATTCTC CATCAACTAA CGCGTATTCT
GATAATTCGG GTAAACAGAA TGTAGGTAAG ATGTTACCTG CAGCAGGCGC AGTGGCGGCA
ACTACCGCAA CAGCCCCTGT TACCGCACCG GTCGTTGCTC CCCCAGTGAG CAGCACCGTC
AGCAACAGCG CCCCAGTAAG TACCTGGAGA TGGCCGACTG ACGGTAAGAT TATTGATAAC
TTTTCCTCAT CAGAAGGTGG GAATAAAGGT GTCGATATCG CCGGGACTCG TGGGCAGCCT
ATCTTCGCTA CCGCCGATGG TCGTGTAGTG TACGCAGGCA ACGCTTTACG GGGTTACGGT
AATCTAATCA TCATCAAACA CAATGATGAT TACCTGAGCG CCTACGCTCA CAACGACACA
ATGCTGGTCC GGGAACAACA AGAAGTGAAG GCGGGTCAAA AAATAGCCAC CATGGGTAGC
ACCGGAACCA GTTCAGTACG TTTGCATTTT GAAATTCGTT ACAAGGGGAA ATCCGTAAAC
CCGCTGCGTT ATCTTCCGCA GCGATAG
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| Protein sequence | MITLRRVAVC TMVSLWLAGC TNTESTSAPI SSVDGGGAAA SSNAGAQANA EGHIVYNRSY
TSIPKGSYSG NTYTVKRGDT LFYIAWITGN DYRDLAQRNN IPEPYSLNVG QSIQLGNGSA
NGNGGMLAAT DATSGGVPKP PSTSQIQTAT VDSPSTNAYS DNSGKQNVGK MLPAAGAVAA
TTATAPVTAP VVAPPVSSTV SNSAPVSTWR WPTDGKIIDN FSSSEGGNKG VDIAGTRGQP
IFATADGRVV YAGNALRGYG NLIIIKHNDD YLSAYAHNDT MLVREQQEVK AGQKIATMGS
TGTSSVRLHF EIRYKGKSVN PLRYLPQR
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