Gene Spro_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0827 
SymbolispF 
ID5603032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp920899 
End bp921372 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID640936338 
Product2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001477061 
Protein GI157369072 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.317282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG GTCACGGTTT TGACGTACAT AAATTTGGTG GCGAAGGGCC GCTGGTGATC 
GGTGGTGTTC GTATCCCTTA TGAAAAAGGT TTGCTGGCTC ACTCCGACGG TGACGTGGCG
CTGCATGCGG CGACCGATGC TCTGTTGGGG GCGGCGGCGT TAGGGGATAT CGGCAAGCTG
TTCCCGGATA CCGACCCGGC ATTCAAAGGG GCCGACAGCC GCGTTCTGCT GCGTGAGGCC
TGGAAACGCA TCCGCGCCAA AGGCTATCGT CTGGGGAATC TGGATATCAC CATTATTGCC
CAGGCCCCTA AAATGGCGCC GCATATCCCG CAAATGCGCG TATTCCTGGC GGAAGATCTG
CAGTGCCATA TGGACGACGT CAACGTTAAG GCCACCACCA CCGAACAGCT CGGTTTCACC
GGGCGCGGCG AGGGCATTGC CTGTGAAGCG GTTGCCTTGT TGATCAAGGA ATAA
 
Protein sequence
MRIGHGFDVH KFGGEGPLVI GGVRIPYEKG LLAHSDGDVA LHAATDALLG AAALGDIGKL 
FPDTDPAFKG ADSRVLLREA WKRIRAKGYR LGNLDITIIA QAPKMAPHIP QMRVFLAEDL
QCHMDDVNVK ATTTEQLGFT GRGEGIACEA VALLIKE