| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0805 |
|---|
| Symbol | |
|---|
| ID | 5603675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 899932 |
|---|
| End bp | 901713 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640936316 |
|---|
| Product | urocanate hydratase |
|---|
| Protein accession | YP_001477039 |
|---|
| Protein GI | 157369050 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2987] Urocanate hydratase |
|---|
| TIGRFAM ID | [TIGR01228] urocanate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.392094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATAA ACCCTACGCA TTGTTATGGC GTGGTGATTC ACCCCACCGC GTTATGGGAT
TCTGCACCAA TACTGTTTGA GGAAAATGCT GTGACTGCAA ATAACAAAGT TCGCAATGTC
GAAGTACGCG CGCCACGCGG CACAAAATTA AATGCAAAAA GCTGGCTGAC CGAAGCGCCG
TTGCGCATGC TGATGAACAA CCTCGATCCT GAAGTGGCGG AGAACCCGCA CGAGCTGGTG
GTATACGGCG GTATTGGCCG CGCCGCGCGT GACTGGGATT GCTACGACAA AATTGTCGCT
ACCCTGAAAA CCCTGGAAGA CGACGAAACC CTGCTGGTGC AGTCCGGCAA ACCGGTTGGG
GTATTCAAAA CCCACAGCAA CGCGCCACGC GTGCTGATCG CCAACTCCAA CCTGGTGCCT
CACTGGGCAA CCTGGGAACA CTTTAACGAA CTGGATGCCA AAGGCCTGGC CATGTACGGC
CAGATGACCG CCGGCAGCTG GATCTACATC GGCAGCCAGG GCATCGTCCA GGGCACCTAC
GAGACCTTCG TCGAAGCGGG TCGCCAGCAT TATGACGGCA GCCTGCAAGG CCGCTGGGTA
CTGACCGCCG GTCTGGGTGG CATGGGTGGC GCACAGCCGC TGGCCGCCAC GCTGGCAGGT
GCTTGCTCGC TGAACATCGA ATGCCAGCAG AGCCGCATCG ATTTCCGCCT GAAAACCCGC
TATGTCGATG AACAGGCCAA AGATCTGGAC GACGCACTGG CCCGCATCAA GAAATACACC
GCTGAAGGCA AAGCCATCTC CATCGCCCTG TGCGGTAACG CGGCGGACGT TTTGCCGGAA
CTGGTGCGCC GCGGCGTGCG TCCAGACATG GTCACCGACC AGACCAGCGC CCACGATCCG
CTGAACGGCT ACCTGCCTAA GGGCTGGAGC TGGGAAGAAT ACCGTCAGCG TGCGCTGACC
GAACCCGCTC AGGTGGTTAT CGCCGCCAAG CAGTCAATGG CTGAACACGT TGAAGCCATG
CTGGCGTTCC AGAAAATGGG CGTGCCAACC TTCGACTACG GCAACAACAT TCGTCAGATG
GCGAAAGAAA TGGGCGTCAG CAATGCCTTT GATTTCCCAG GCTTCGTACC GGCTTATATC
CGTCCGCTGT TCTGCCGCGG CGTTGGCCCG TTCCGCTGGG CCGCACTGTC TGGCGATCCA
CAAGACATCT ACAAAACCGA CGCCATGGTT AAAGAATTGA TCCCGGATGA CGAGCATCTG
CACCGCTGGC TGGATATGGC ACGCGAGCGC ATCAGCTTCC AGGGTCTGCC GGCACGTATC
TGCTGGGTCG GTCTGGGCCA ACGCGCCAAA CTGGGTCTGG CGTTCAACGA AATGGTCCGC
AGCGGTGAGC TGTCTGCACC TATCGTCATC GGCCGTGACC ATCTGGACTC CGGCTCGGTT
GCCAGCCCGA ACCGTGAAAC CGAATCAATG AAAGACGGCT CAGACGCCGT ATCCGACTGG
CCGTTGCTCA ATGCCCTGCT CAATACCGCC AGCGGCGCGA CCTGGGTTTC CCTGCACCAC
GGCGGTGGCG TCGGCATGGG CTTCTCCCAA CACTCCGGTA TGGTTATCGT TTGTGACGGC
ACCGATGAAG CCGCAGAACG CATCGCCCGC GTATTACATA ATGACCCGGC CACCGGCGTA
ATGCGTCACG CCGATGCCGG TTACGACATC GCCATTGAAT GCGCCCGCGA GCAAGGTCTG
AACCTGCCGA TGGTGGCTGC GACTCAAGGA GACAAAGCAT GA
|
|---|
| Protein sequence | MLINPTHCYG VVIHPTALWD SAPILFEENA VTANNKVRNV EVRAPRGTKL NAKSWLTEAP
LRMLMNNLDP EVAENPHELV VYGGIGRAAR DWDCYDKIVA TLKTLEDDET LLVQSGKPVG
VFKTHSNAPR VLIANSNLVP HWATWEHFNE LDAKGLAMYG QMTAGSWIYI GSQGIVQGTY
ETFVEAGRQH YDGSLQGRWV LTAGLGGMGG AQPLAATLAG ACSLNIECQQ SRIDFRLKTR
YVDEQAKDLD DALARIKKYT AEGKAISIAL CGNAADVLPE LVRRGVRPDM VTDQTSAHDP
LNGYLPKGWS WEEYRQRALT EPAQVVIAAK QSMAEHVEAM LAFQKMGVPT FDYGNNIRQM
AKEMGVSNAF DFPGFVPAYI RPLFCRGVGP FRWAALSGDP QDIYKTDAMV KELIPDDEHL
HRWLDMARER ISFQGLPARI CWVGLGQRAK LGLAFNEMVR SGELSAPIVI GRDHLDSGSV
ASPNRETESM KDGSDAVSDW PLLNALLNTA SGATWVSLHH GGGVGMGFSQ HSGMVIVCDG
TDEAAERIAR VLHNDPATGV MRHADAGYDI AIECAREQGL NLPMVAATQG DKA
|
|---|
| |