Gene Spro_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0801 
Symbol 
ID5603754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp894976 
End bp895821 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content60% 
IMG OID640936312 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001477035 
Protein GI157369046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4176] ABC-type proline/glycine betaine transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.730123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.990887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAG ATCGTTTTAC TTTCTCCATC GCCGATTGGA TCAATCGCTG GGTCGACGTG 
CTGGTCAACA ACTATGGCGA TATGTTCCGC AAGATCTCCG ACACCTTGCT GTGGGCGGTG
ATCCACCTCG AAAGCCTGCT GCGCGCCACC CCATGGTGGG TGATGCTGGC CGTGGTCGGG
CTACTGGCCT GGCACGCCAC CCGCCGTTGG CTGCCGACGG TGGTGATCGT CGGCCTGTTG
CTGCTGGTCG GTACCGCAGG GATGTGGGAC AAATTGATGC AAACCCTGGC GCTGGTGCTG
GTCGCCACGC TGCTGGCGGT GATTATCGGC ATTCCGCAAG GCATATTGGC GGCGCGTAGC
GATCGCGTAC GGGCCGTAAT GATGCCGCTG ATGGACGTGA TGCAAACCAT GCCGAGCTTC
GTCTACCTGA TCCCGGTGTT GATGCTGTTC GGGCTGGGCA AGGTGCCGGC AATTCTGGCG
ACGGTGATCT ACGCCACCCC ACCGCTGATC CGCCTGACCG ATTTGGGTAT CCGCCAGGTG
GACAAAGAAG TGATGGAATC CGTCACTGCC TTTGGCGCCA ACCGCTGGCA GAAACTGTTC
GGCGTGCAGT TGCCGCTGGC GCTGCCAAGC ATCATGGCCG GTATCAACCA GACCACCATG
ATGTCGCTGT CAATGGTGGT TGTGGCCTCG ATGATCGGTG CACGCGGGCT GGGCGAAGAC
GTGCTGGTGG GCATTCAGAC ACTGAACGTC GGTCTGGGCC TGGAGGCAGG TCTGGCGATC
GTTATTCTCG CCGTAGTCAT TGACCGTATC ACCCAGGCTT ATGGCCGCAC CGCCATTGCG
AGGTAA
 
Protein sequence
MFPDRFTFSI ADWINRWVDV LVNNYGDMFR KISDTLLWAV IHLESLLRAT PWWVMLAVVG 
LLAWHATRRW LPTVVIVGLL LLVGTAGMWD KLMQTLALVL VATLLAVIIG IPQGILAARS
DRVRAVMMPL MDVMQTMPSF VYLIPVLMLF GLGKVPAILA TVIYATPPLI RLTDLGIRQV
DKEVMESVTA FGANRWQKLF GVQLPLALPS IMAGINQTTM MSLSMVVVAS MIGARGLGED
VLVGIQTLNV GLGLEAGLAI VILAVVIDRI TQAYGRTAIA R