Gene Spro_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0780 
Symbol 
ID5604206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp869452 
End bp870306 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content58% 
IMG OID640936291 
Productregulatory protein AmpE 
Protein accessionYP_001477014 
Protein GI157369025 
COG category[V] Defense mechanisms 
COG ID[COG3725] Membrane protein required for beta-lactamase induction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.29134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGT TTACGCTGTT ACTGGTTCTG GCGTGGGAAC GTTTGTTCAA GCTGGGTGAG 
CATTGGCAGT TGGACCATCG GCTGGAGGTG GTGTTTCATC GGCTGCATCG GTTCTCGCTG
GCGCAGACGT TGCTGATGAC CCTGGCCTGG ATGGTGGTGG TCGGGGGCAT TCTGTGGCTG
TCTCAAGGGC TGTTTTTCGG CGTAGTGACG CTGTTGCTGT GGATTATCAT TGATTTGCTG
TGTGTGGGTG CGGGCATCAA GCGTAAACAC TATCGCGCCT ATCTGAAAGC GGCGCGGCAG
GGAGATGCTC ATGCCAGCGA CCAGATGGCG GAGGAGCTGG CACTGATCCA CGGTTTGCCG
GTGGATTGCA GCGAAGAGCT GCGTCTGCGT GAACTGCAAA ATGCGTTGCT GTGGATTAAC
TTCCGTTATT ATCTGGCACC GCTGTTCTGG TTCGTGGTCT GCGGGCCTTA TGGGCCGATT
GCGCTGGCGG GCTACTCCTT CCTGCGTGCT TACCAGACCT GGTTGGCGCG CCATAATACC
CCGCTGGAGC GTTCGCAGTC GGGCATCGAT CATCTGTTGA ACTGGCTGGA CTGGATCCCG
GTGCGTCTGG CCGGTGTGGC TTACGCCCTG TTTGGACATG GTGAGAGAGC ACTGCCGGCA
TGGTTTGCAT CGCTGGGCGA TCTCCATTCT TCGCAGTATC AGGTGCTGAC GCGGCTGGCA
CAGTTCTCAC TGGCGCGTGA TCCCCATATG GATCCGGTGC AGACCCCGCG GGCGGCGGTA
ACCCTGGCAC GTAAGGTGAC GATGATTATC GTGGTGGTGG TAGCCCTGCT GACGATTTAC
GGTACTTTGC TCTGA
 
Protein sequence
MTLFTLLLVL AWERLFKLGE HWQLDHRLEV VFHRLHRFSL AQTLLMTLAW MVVVGGILWL 
SQGLFFGVVT LLLWIIIDLL CVGAGIKRKH YRAYLKAARQ GDAHASDQMA EELALIHGLP
VDCSEELRLR ELQNALLWIN FRYYLAPLFW FVVCGPYGPI ALAGYSFLRA YQTWLARHNT
PLERSQSGID HLLNWLDWIP VRLAGVAYAL FGHGERALPA WFASLGDLHS SQYQVLTRLA
QFSLARDPHM DPVQTPRAAV TLARKVTMII VVVVALLTIY GTLL