Gene Spro_0740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0740 
Symbol 
ID5604901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp822886 
End bp824085 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content58% 
IMG OID640936251 
Productsugar efflux transporter 
Protein accessionYP_001476974 
Protein GI157368985 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00899] sugar efflux transporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.797465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC AGCGCTGGCT GCCACGCCGC TTTAATCCCG TCTTTGCCGC ATTCCTGCTG 
ATTGCCTTTC TTTCCGGCAT TGCCGGCGCG CTTTTGGCGC CGACGCTGAG CCTGTTCCTG
ACCACCGAGG TTGAGGTGCG GCCGCTGTGG GTTGGCCTGT TCTATACCGT CAACGCTATT
GTCGGCATCG CGGTCAGTTT CCTGTTGGCC AAGCGTTCGG ATACGCGCGG CGATCGTCGC
AAGTTGATTT TGCTGTGCTG CCTGATGGCG ATCGGTAACT GCTTGCTGTT TGCCTTTAAC
CGTGACTACC TGACGCTGAT CACCGCCGGG GTATTGCTGT CGGCGATTGC CAATACCGCG
ATGCCGCAGA TTTTTGCGCT GGCACGAGAA TATGCAGACA GCTCGGCGCG CGAAGTGGTG
ATGTTCAGCT CGGTGATGCG CGCACAACTG TCGCTGGCCT GGGTGATTGG CCCGCCGCTG
TCGTTTACGC TGGCGCTGAA CTACGGGTTT ACCTGGATGT TCATGATTGC CGCTGCGACC
TTCGCGATTT GTGCATTGCT GGTATGGTTT ACCCTGCCTT CGGTACCACG TGCGGAGCAA
AGTAGTTCGG AGCTGAACGC TATTGCTTCG GTTCCGATTG CCCCCGTCAG CGCCTGGCGC
AACCGCGATG TACGTCGTTT ATTTATTGCG TCGATGCTGA TGTGGACCTG CAACACCATG
TATATCATCG ATATGCCGCT GTATATCACC GCCGATCTGG GCCTGCCGGA AAACCTTGCC
GGGCTGCTGA TGGGCACGGC CGCCGGGCTG GAGATCCCGG CCATGTTGCT GGCGGGTTAC
TACGTCAAAC GATTCGGCAA GCGCAATATG ATGCTGTTCG CCGTGGCGGC AGGCATTCTG
TTTTATGCCG GATTGGTGGT GTTTAAATTT AAGCTGGCGC TGATGGTATT ACAGCTGTTC
AACGCCATCT TTATCGGCAT CATCGCCGGT ATTGGCATGC TCTATTTCCA GGACCTGATG
CCGGGACGAC CGGGGGCTGC GACCACGCTG TTTACCAACA GTATTTCTAC CGGGGTGATC
CTGGCCGGGG TGCTGCAGGG GGCGCTGGTG GAAAACCTGG GGCACTATGC GGTTTACTGG
TTGGCGACTG TCCTGGCAGT AGTGGCGCTG TGGATGAGTG CCCGCGTGCG GGAAGTGTGA
 
Protein sequence
MKRQRWLPRR FNPVFAAFLL IAFLSGIAGA LLAPTLSLFL TTEVEVRPLW VGLFYTVNAI 
VGIAVSFLLA KRSDTRGDRR KLILLCCLMA IGNCLLFAFN RDYLTLITAG VLLSAIANTA
MPQIFALARE YADSSAREVV MFSSVMRAQL SLAWVIGPPL SFTLALNYGF TWMFMIAAAT
FAICALLVWF TLPSVPRAEQ SSSELNAIAS VPIAPVSAWR NRDVRRLFIA SMLMWTCNTM
YIIDMPLYIT ADLGLPENLA GLLMGTAAGL EIPAMLLAGY YVKRFGKRNM MLFAVAAGIL
FYAGLVVFKF KLALMVLQLF NAIFIGIIAG IGMLYFQDLM PGRPGAATTL FTNSISTGVI
LAGVLQGALV ENLGHYAVYW LATVLAVVAL WMSARVREV