Gene Spro_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0717 
Symbol 
ID5605141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp795078 
End bp795692 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content55% 
IMG OID640936228 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001476951 
Protein GI157368962 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.392476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAA CTTCGCTGTT CGTTGCCGGT ATTGCTACCC TGGGTATGCT GTCGCCCGGC 
CCGGATTTTT TCATGGTGAT CAAGAATGCC ACCCGCTACC CGCGCCTGGC CGCCATGATG
ACCGCTTTCG GCGTGATCTG CGGCGTCGCG ACCCATATGT CTTACTGCGT TGCCGGACTG
GCGGTAGTGA TCACCACCAC CCCATGGCTG TTTAACGTAC TGAAATACGC CGGTGCGGTC
TATCTGGTCT GGATTGGCAT TCAGGCGCTG TTGTCACGCG GCGGCAGTAA AATGAACGTC
AGTAATGTGC CACAGCAGCA GGTGAGTCTG AAAAGTGCCT TTGTGCAGGG CTATCTGTGT
AATCTGCTCA ATCCGAAGGC CACGTTGTTC TTCCTGGCGG TATTCACTCA GGTATTGCAG
ATCGACTCCG GGTTGGGTGA AAAACTGTGG TATGCGGGGA TTATCCTTGG CCTGTCCGTC
CTGTGGTGGC CGGTGCTGGT GCTCCTGATC CAAAGTGGTC CGGTGCGTCG CGGGCTGGAA
AAGACCCAGA AGATAGTTGA TAAATTGCTG GGCGGCATGT TGATTGCCCT GGGCATCAAA
GTCGCACTGA GCTAA
 
Protein sequence
MLETSLFVAG IATLGMLSPG PDFFMVIKNA TRYPRLAAMM TAFGVICGVA THMSYCVAGL 
AVVITTTPWL FNVLKYAGAV YLVWIGIQAL LSRGGSKMNV SNVPQQQVSL KSAFVQGYLC
NLLNPKATLF FLAVFTQVLQ IDSGLGEKLW YAGIILGLSV LWWPVLVLLI QSGPVRRGLE
KTQKIVDKLL GGMLIALGIK VALS