Gene Spro_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0688 
Symbol 
ID5605570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp758395 
End bp759348 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content55% 
IMG OID640936199 
Producttransaldolase B 
Protein accessionYP_001476922 
Protein GI157368933 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0573478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00205888 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGATA AATTAACTTC CCTGCGCCAA CTGACTACCG TGGTTGCAGA TACGGGCGAT 
ATCGCGGCTA TGAAGCTGTA TCAACCGCAA GATGCTACGA CCAACCCTTC GCTGATCCTC
AATGCAGCCC AAATTCCTGA ATACCGCAAA CTGATTGACG AAGCCATTGC CTGGGCTCGC
GAGCAGAGCA GCGATCGCGA ACAGCAGATC GCCGATGCCG CTGACAAGCT GGCCGTTAAC
ATTGGTCTGG AAATCCTGAA GCTGGTTCCA GGCCGCATCT CCACCGAAGT GGACGCACGT
CTGTCTTACG ACACCGTAGC CAGCGTTGCC AAGGCCAAGC GCCTGATCAA ACTGTACAAC
GATGCCGGCA TCAGCAACGA TCGCATCCTG ATCAAACTGG CCTCTACCTG GCAGGGTATC
CGCGCTGCGG AACAGCTGGA AAAAGAAGGC ATCAACTGTA ACCTGACGCT GCTGTTCTCC
TTTGCTCAGG CCCGTGCCTG CGCCGAAGCC GGCGTTTACC TGATCTCTCC GTTTGTTGGC
CGTATCCTCG ACTGGTACAA AGCCAATGGC GACAAGAAAG AGTTCGCGCC AAACGAAGAT
CCAGGTGTGG TTTCCGTTAC CGAGATCTAC CAGTATTACA AACAGCACGG TTTCAAAACC
GTGGTGATGG GCGCCAGCTT CCGTAACGTT GGCGAAATCA TCGAACTGGC CGGTTGTGAC
CGCCTGACCA TCGCCCCTGC ACTGCTGAAA GAGCTGGCAG AGAGCGAAGG TACACTGGAG
CGTAAACTGG CCTACACCGG CGAAGTGCAA GCGCGTCCTG CCGCTTTGAC CGAGCCTGAG
TTCTACTGGC AGCACAACCA GGATCCAATG GCAGTTGAGA AACTGACCGA CGGTATCCGC
AAGTTTGCCG TAGACCAGGG CAAGCTGGAA AAAATGATCG CCGATCTGCT GTAA
 
Protein sequence
MTDKLTSLRQ LTTVVADTGD IAAMKLYQPQ DATTNPSLIL NAAQIPEYRK LIDEAIAWAR 
EQSSDREQQI ADAADKLAVN IGLEILKLVP GRISTEVDAR LSYDTVASVA KAKRLIKLYN
DAGISNDRIL IKLASTWQGI RAAEQLEKEG INCNLTLLFS FAQARACAEA GVYLISPFVG
RILDWYKANG DKKEFAPNED PGVVSVTEIY QYYKQHGFKT VVMGASFRNV GEIIELAGCD
RLTIAPALLK ELAESEGTLE RKLAYTGEVQ ARPAALTEPE FYWQHNQDPM AVEKLTDGIR
KFAVDQGKLE KMIADLL