| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0681 |
|---|
| Symbol | |
|---|
| ID | 5605621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 748413 |
|---|
| End bp | 749129 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640936192 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_001476915 |
|---|
| Protein GI | 157368926 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000276194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.238426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCC CGCACATTCT GATTGTCGAA GACGAGTTAG TCACTCGTAA CACCCTGAAG
AGCATTTTCG AGGCGGAAGG CTACGTTGTT CATGAAGCCA ATGATGGTGC AGAGATGCAC
AACATCCTGT CTGAAAATGA TATCAATCTG GTTATCATGG ACATCAATCT GCCAGGCAAA
AATGGCCTGC TGCTGGCGCG TGAATTGCGC GAACAGGCCA GCGTTGCGCT GATGTTCCTG
ACCGGCCGTG ATAACGAAGT TGACAAGATC CTCGGCCTGG AAATCGGCGC CGATGATTAC
ATCACCAAGC CATTTAATCC GCGTGAATTG ACCATTCGCG CGCGTAACCT GCTGTCACGC
ACCATGAACC TGGGCAGCGT CGGCGAAGAA CGTCGCCTGG TTGAAAGCTA TAAGTTCAAC
GGTTGGGAGC TGGACATCAA CAGCCGCTCA CTGATCAGCC CCGCGGGCGA GCAATACAAA
CTGCCACGCA GTGAATTCCG CGCCATGCTG CACTTCTGCG AAAACCCGGG CAAGATCCAA
TCCCGTGGCG AACTGCTCAA GAAGATGACC GGCCGTGAGC TGAAGCCGCA TGACCGCACC
GTGGACGTGA CCATCCGTCG CATCCGCAAG CACTTCGAAT CAACGCCGGA CACGCCGGAA
ATCATCGCTA CTATTCACGG TGAAGGTTAC CGTTTCTGCG GCGATCTGGA AGAGTAA
|
|---|
| Protein sequence | MQTPHILIVE DELVTRNTLK SIFEAEGYVV HEANDGAEMH NILSENDINL VIMDINLPGK
NGLLLARELR EQASVALMFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLSR
TMNLGSVGEE RRLVESYKFN GWELDINSRS LISPAGEQYK LPRSEFRAML HFCENPGKIQ
SRGELLKKMT GRELKPHDRT VDVTIRRIRK HFESTPDTPE IIATIHGEGY RFCGDLEE
|
|---|
| |