Gene Spro_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0657 
Symbol 
ID5605747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp721013 
End bp721786 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content60% 
IMG OID640936168 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_001476891 
Protein GI157368902 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.707092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACT TCACCGACAC CCACTGCCAC TTCGATTTCC CGCCGTTCAG CGGTCAAGAA 
CGCGAAAGCC TGGAGTTGGC GGAGCAAGCG GGCGTGCGAC GGATTATCGT ACCTACGGTG
ACCGCCGATC GTTTTGTGCG GGTATTGAAG CTGGCACGCG ATTATCCACC GCTGTTTGCC
GCCCTGGGGC TACACCCGCT GTATATTGCC GAGCACCATG AGCCGGAGCT GGAACAATTG
GCGGGGTTCC TGGCCAGCCG ACCGCCGAAG CTGGTGGCGG TAGGGGAGAT TGGCCTCGAT
CTGTATATGG AAAACCCGCA GTTCGAGCGC CAGCAGCAGG TGTTAACCGC GCAATTGAAG
CTGGCAAAGC AACATGATTT GCCAGTGATC CTGCATTCGC GCCGCAGCCA CGATCAGTTG
GCGGCGATGC TGCGTCGCAC CGAAGTACCT CGTCGCGGCG TGGTGCACGG CTTTGCTGGC
AGTCTGTCGC AGGCGCAGGC GTTTATCCGC CTGGGATATT ACATTGGCGT AGGAGGCACC
ATCAGCTATG AGCGGGCGCA GAAAACCCGC AATGTCATGG CCCAACTGCC GTTGACGTCG
CTGCTGTTGG AAACCGATGC GCCCGACATG CCGCTGGCCG GTTACCAGGG GCAACCGAAC
CGCCCCGAGC GCGCTGCTGA AGTGTTCGCT GCTCTGTGCC AATTGCGCCC AGAGTCGGAG
GAGATGATCG GCGCCCAATT ACAGCAAAAT ACACGAGAGT TATTTTCAGT GTGA
 
Protein sequence
MHDFTDTHCH FDFPPFSGQE RESLELAEQA GVRRIIVPTV TADRFVRVLK LARDYPPLFA 
ALGLHPLYIA EHHEPELEQL AGFLASRPPK LVAVGEIGLD LYMENPQFER QQQVLTAQLK
LAKQHDLPVI LHSRRSHDQL AAMLRRTEVP RRGVVHGFAG SLSQAQAFIR LGYYIGVGGT
ISYERAQKTR NVMAQLPLTS LLLETDAPDM PLAGYQGQPN RPERAAEVFA ALCQLRPESE
EMIGAQLQQN TRELFSV