Gene Spro_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0649 
SymbolrsmC 
ID5605798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp714386 
End bp715429 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content58% 
IMG OID640936160 
Product16S ribosomal RNA m2G1207 methyltransferase 
Protein accessionYP_001476883 
Protein GI157368894 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0476273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAT TAACCCCCGC CAGTGAAGTC ATGCTGCGCC ACAGTGATGA GTTTATCGAA 
CGCCGCGTTC TGTTCGCCGG TGACCTGCAG GACGCCCTGC CGGCCCAATT TGAGGCCGCG
GATGTGCGTG TCCATACCCA GCAATACCAT CACTGGCAGT TACTGAACCG GGCGATGGGT
GACAACGTGC AGTACGGCCT GACCGTAGAC GCTGCGTTCG TCGCCGAGTG CGATACGCTG
ATCTACTACT GGCCGAAGAG CAAACAGGAA GCGCAATTCC AGCTGTGCAA CATTCTGGCA
CTGCTGCCGG TAGGCACTGA CGTGTTCGTA GTCGGTGAGA ACCGCAGCGG CGTGCGCAGC
GCCGATCAGA TGGTGGAAGA TTACGCCACA CTGGTGAAAA TCGACAGCGC CCGCCGCTGT
GGCCTGTATC ACGGTCGCCT GGACACCCAG ACCGAATTCA ACCTGGAAGA CTGGTGGGAA
AGCTATCAGT TGCACGATCT GGAAGTGAAA ACCCTGCCGG GCGTGTTCAG CCGCGACGGA
CTGGATGTCG GTAGCTCACT GCTGCTGTCG ACGCTGGATA AACACATGAA AGGCAAAGTG
CTGGACGTGG GTTGTGGTGC CGGTGTGATG GCCTCGGTGC TGTCCAAACT GTCGCCAAAA
ATGAAGCTGA CCCTCAGCGA TGTCAACGCC GCAGCCATTG AGTCCAGCCG CGCAACGCTG
GCCGCTAACG GCATTGAAGG TGAAGTGATT GTCAGTAACG TCTATTCCGA CATTACCGGC
CGTTTCGATC TGATCATCTC CAACCCACCG TTCCATGATG GGCTGCAAAC CAGCCTGACG
GCGGCGGAAA CCCTGATCCG CGGTGCGTTG AAGCACTTAG GCGTCGGCGG TAAACTGCGC
ATCGTGGCCA ACGCCTTCCT GCCGTACCCG GACATTCTGG ACGCCACCTT CGGCAGCCAT
GAAGTGCTGG CGCAAAACGG CCGCTTCAAG GTGTACCAGG CAACCGTTGC CCGTGCACCA
CGCGATGCCA AGAAGAAGAA ATAA
 
Protein sequence
MSALTPASEV MLRHSDEFIE RRVLFAGDLQ DALPAQFEAA DVRVHTQQYH HWQLLNRAMG 
DNVQYGLTVD AAFVAECDTL IYYWPKSKQE AQFQLCNILA LLPVGTDVFV VGENRSGVRS
ADQMVEDYAT LVKIDSARRC GLYHGRLDTQ TEFNLEDWWE SYQLHDLEVK TLPGVFSRDG
LDVGSSLLLS TLDKHMKGKV LDVGCGAGVM ASVLSKLSPK MKLTLSDVNA AAIESSRATL
AANGIEGEVI VSNVYSDITG RFDLIISNPP FHDGLQTSLT AAETLIRGAL KHLGVGGKLR
IVANAFLPYP DILDATFGSH EVLAQNGRFK VYQATVARAP RDAKKKK