Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0649 |
Symbol | rsmC |
ID | 5605798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 714386 |
End bp | 715429 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640936160 |
Product | 16S ribosomal RNA m2G1207 methyltransferase |
Protein accession | YP_001476883 |
Protein GI | 157368894 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0476273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCAT TAACCCCCGC CAGTGAAGTC ATGCTGCGCC ACAGTGATGA GTTTATCGAA CGCCGCGTTC TGTTCGCCGG TGACCTGCAG GACGCCCTGC CGGCCCAATT TGAGGCCGCG GATGTGCGTG TCCATACCCA GCAATACCAT CACTGGCAGT TACTGAACCG GGCGATGGGT GACAACGTGC AGTACGGCCT GACCGTAGAC GCTGCGTTCG TCGCCGAGTG CGATACGCTG ATCTACTACT GGCCGAAGAG CAAACAGGAA GCGCAATTCC AGCTGTGCAA CATTCTGGCA CTGCTGCCGG TAGGCACTGA CGTGTTCGTA GTCGGTGAGA ACCGCAGCGG CGTGCGCAGC GCCGATCAGA TGGTGGAAGA TTACGCCACA CTGGTGAAAA TCGACAGCGC CCGCCGCTGT GGCCTGTATC ACGGTCGCCT GGACACCCAG ACCGAATTCA ACCTGGAAGA CTGGTGGGAA AGCTATCAGT TGCACGATCT GGAAGTGAAA ACCCTGCCGG GCGTGTTCAG CCGCGACGGA CTGGATGTCG GTAGCTCACT GCTGCTGTCG ACGCTGGATA AACACATGAA AGGCAAAGTG CTGGACGTGG GTTGTGGTGC CGGTGTGATG GCCTCGGTGC TGTCCAAACT GTCGCCAAAA ATGAAGCTGA CCCTCAGCGA TGTCAACGCC GCAGCCATTG AGTCCAGCCG CGCAACGCTG GCCGCTAACG GCATTGAAGG TGAAGTGATT GTCAGTAACG TCTATTCCGA CATTACCGGC CGTTTCGATC TGATCATCTC CAACCCACCG TTCCATGATG GGCTGCAAAC CAGCCTGACG GCGGCGGAAA CCCTGATCCG CGGTGCGTTG AAGCACTTAG GCGTCGGCGG TAAACTGCGC ATCGTGGCCA ACGCCTTCCT GCCGTACCCG GACATTCTGG ACGCCACCTT CGGCAGCCAT GAAGTGCTGG CGCAAAACGG CCGCTTCAAG GTGTACCAGG CAACCGTTGC CCGTGCACCA CGCGATGCCA AGAAGAAGAA ATAA
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Protein sequence | MSALTPASEV MLRHSDEFIE RRVLFAGDLQ DALPAQFEAA DVRVHTQQYH HWQLLNRAMG DNVQYGLTVD AAFVAECDTL IYYWPKSKQE AQFQLCNILA LLPVGTDVFV VGENRSGVRS ADQMVEDYAT LVKIDSARRC GLYHGRLDTQ TEFNLEDWWE SYQLHDLEVK TLPGVFSRDG LDVGSSLLLS TLDKHMKGKV LDVGCGAGVM ASVLSKLSPK MKLTLSDVNA AAIESSRATL AANGIEGEVI VSNVYSDITG RFDLIISNPP FHDGLQTSLT AAETLIRGAL KHLGVGGKLR IVANAFLPYP DILDATFGSH EVLAQNGRFK VYQATVARAP RDAKKKK
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