Gene Spro_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0644 
Symbol 
ID5605888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp708895 
End bp710124 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content57% 
IMG OID640936152 
ProductL-fucose transporter 
Protein accessionYP_001476878 
Protein GI157368889 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR00885] L-fucose:H+ symporter permease 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.510185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.606188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTG AAAAAACTGC AGCCCCACCT CAGGTGGGCG CCAAGGCGAC GGCCAATCTG 
CGCTGGGCTT TTATCTTGGT GACCAGCCTG TTCTTTATGT GGGGGCTGTC ATATGGCCTG
CTGGACGTAT TAAATAAGCA CTTTCAGGAA ACGCTGCACG TGACCAAGGC GCAGTCGGGA
TTATTACAGG CGGCATATTT TGGCGCCTAC TTCCTGGTGG CGCTGCCCGC CGGCTATTTT
ATGGATAAAA AAGGCTACAA AGCCGGCATT CTGATCGGAC TGTGCCTGTA TGCGCTCGGG
GCATTGCTGT TTGTACCGGC GGCATCCGCC AACAGTTTTG GCATGTTCCT GTTTGCCCTG
TTTGTGATTG CCTGCGGGCT GGGTTGCCTG GAAACCGCCG CCAACCCTTA CGCCACGGTA
TTGGGGGACG CAAAGGGGGC CGAATGGCGG CTGAACCTGT CCCAGTCGTT TAATGGGTTA
GGGCAGTTTA TCGGCCCGAT GATCGGCGGC ACGCTGTTTT TCTCCGCCAC CCAGGGGGCG
GGCAGCGGTG ACCAGAGTGC GGTGAAGATG ACCTATGTGG CGATCGCCGT GTTGGTACTG
CTGATTGCCT TTTTGTTCAG CCGCACCCGG TTGCCGGACA TCCGCGAGGA AGAGCAGCCG
GAGCACGGTG AAATTGCTCA GGGGTTGTGG CAGCACAAGC ACTTTGTTGG CGGGGTGATC
ACCCAGTTCT TCTACGTGGC GGCACAGGTC GGTGTTGGTG CGTTCTTTAT TAACTACGCC
ACCGAACACT GGAGCGACGT TTCCAACCAA AGCGCGTCCT ATTTGCTCTC CATCGCCATG
ATTTGCTTTA TGGTCGGGCG CTTCTTCAGC ACCTGGCTGA TGGGCAGGGT CAAACCGGCC
ACGCTGTTGA TGGTTTACTC GTTGGTCAAC ATTGTGCTGT GCGGTGTCGT CATGCTCAGT
ATGGATGGCA TCTCGGTGGT GGCGCTGATC GCCGTATTCT TCTTTATGTC GATTATGTTC
CCGACCATTT TCGCCCTTGG GGTGAAAAAC ATGGGCAAAC ACACCAAGCG CGCCAGCTCC
TTTATGATCA TGGCGATCGT TGGCGGTGCC ATCATGCCTT ACTTTATGGG GGCGCTGGCG
GACAGGTATA GCACGGCGTT GTCGTATTGC CTGCCGCTGC TGTGCTTCGC CGTGGTGTTT
GCTTACGGCC TGCAGCAGCG CCGCCGCTAA
 
Protein sequence
MLAEKTAAPP QVGAKATANL RWAFILVTSL FFMWGLSYGL LDVLNKHFQE TLHVTKAQSG 
LLQAAYFGAY FLVALPAGYF MDKKGYKAGI LIGLCLYALG ALLFVPAASA NSFGMFLFAL
FVIACGLGCL ETAANPYATV LGDAKGAEWR LNLSQSFNGL GQFIGPMIGG TLFFSATQGA
GSGDQSAVKM TYVAIAVLVL LIAFLFSRTR LPDIREEEQP EHGEIAQGLW QHKHFVGGVI
TQFFYVAAQV GVGAFFINYA TEHWSDVSNQ SASYLLSIAM ICFMVGRFFS TWLMGRVKPA
TLLMVYSLVN IVLCGVVMLS MDGISVVALI AVFFFMSIMF PTIFALGVKN MGKHTKRASS
FMIMAIVGGA IMPYFMGALA DRYSTALSYC LPLLCFAVVF AYGLQQRRR