Gene Spro_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0626 
Symbol 
ID5606080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp691701 
End bp692465 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content59% 
IMG OID640936134 
Product4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG2 subunit 
Protein accessionYP_001476860 
Protein GI157368871 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID[TIGR02303] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG CCCGTATTCG CCATCACGGC CAAATCTTTA ACGTCAGCGT TGACCAGCAA 
CTGCGTGTCA CCCTGCCGGA CGGCAGCGTG CTCAATGAAC TGGACGTCGA ATGGCTGCCA
CCGGCGCAGG GCACGGTATT TGCCCTGGGC CTGAACTATG CCGACCATGC CAGCGAACTG
GAATTCAAGG CACCGGAAGA ACCGCTGGTG TTCCTGAAAG CCCCCAACAC CCTGACCGGC
CACCGTCAGG TGTCGGTGCG CCCGGCCGAC GTCGAGTATA TGCACTACGA AGCCGAGCTG
GTGGCGGTGA TCGGCAAAAC GGCACGCAAC GTCAGCCGTG AGAACGCCAT GGACTATGTA
GCGGGTTACA CCCTGTGTAA CGACTACGCC ATCCGCGACT ATCTGGAAAA TTATTACCGT
CCGAACCTGC GGGTGAAAAG CCGCGACACC CTGACGCCGA TTGGGCCGTA CATCGTCGAT
CGCGATGATA TCGCCGATCC GCACCGTCTG GCGCTCAGCA CTTACGTCAA CGGTGAGCTG
CGCCAGCGCG GCAGCACCGG CGACATGATT TTTGATATCC CCTATTTGAT CAGTTACCTG
AGCGAATTTA TGACGCTGCA GCCGGGCGAT ATGATCGCCA CCGGCACGCC GAAAGGGTTG
GCCGACGTGC AACCGGGGGA CGAAGTGGTG GTGGAGATCG AGGGCATTGG CCGTCTGGTT
AACCACATCA TCAGTGAAAA AGATTACGAG GAAAGCCTGC GATGA
 
Protein sequence
MKHARIRHHG QIFNVSVDQQ LRVTLPDGSV LNELDVEWLP PAQGTVFALG LNYADHASEL 
EFKAPEEPLV FLKAPNTLTG HRQVSVRPAD VEYMHYEAEL VAVIGKTARN VSRENAMDYV
AGYTLCNDYA IRDYLENYYR PNLRVKSRDT LTPIGPYIVD RDDIADPHRL ALSTYVNGEL
RQRGSTGDMI FDIPYLISYL SEFMTLQPGD MIATGTPKGL ADVQPGDEVV VEIEGIGRLV
NHIISEKDYE ESLR