| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0625 |
|---|
| Symbol | |
|---|
| ID | 5605853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 691072 |
|---|
| End bp | 691704 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640936133 |
|---|
| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit |
|---|
| Protein accession | YP_001476859 |
|---|
| Protein GI | 157368870 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | [TIGR02305] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA CCGTTTTTTC CGTCGCGTTG AACCACCGCA GCCAGATGGA CGCCTGGGAT
CAGGCGTTTC ATCAGCCACC TTATAAAACC CCGCCGAAGA CCCCGGTGTG GTTTATCAAA
CCCCGTAATA CCCACCTCGC CAACGGCGGG GCGATCCCGT TTCCTGCCGG TGAGCAAGTG
CAGAGCGGCG CCACGCTGGC GGTGGTGATT GGCAACACCG CGCGCAAGGT TCCTGCCGAA
CGGGTGGCCG ATTATCTGGC CGGCTATGCG TTGGCCAATG ATGTCAGCCT GCCGGAAAGC
AGTTTTTACC GCCCGGCGAT CAAAGCGAAA TGCCGCGATG GCTTTTGTCC CTTGGGGGAT
ATCGGTCAAT TGGCAACCAG CGACAGGCTG GAAATTATCA CCGAAATCAA CGGTGTGGAG
CAGGACCGCT GGTCGACGGC CGATCTGGTA CGTTCGGTGC CGGAACTGAT CGCCGCCATC
AGCGATTTTA TTACCCTGCA GCCGGGCGAC GCGGTGCTGA TCGGAACGCC GCACCAGCGG
GTGGAGATTA AACCGGGGGA TGAAGTGACG GTACGCGCCG CCGGTCTGCC GACCCTGACC
AACCGCGTGA CGCAGGCAGG AGGAGCATCA TGA
|
|---|
| Protein sequence | MKGTVFSVAL NHRSQMDAWD QAFHQPPYKT PPKTPVWFIK PRNTHLANGG AIPFPAGEQV
QSGATLAVVI GNTARKVPAE RVADYLAGYA LANDVSLPES SFYRPAIKAK CRDGFCPLGD
IGQLATSDRL EIITEINGVE QDRWSTADLV RSVPELIAAI SDFITLQPGD AVLIGTPHQR
VEIKPGDEVT VRAAGLPTLT NRVTQAGGAS
|
|---|
| |