Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0602 |
Symbol | |
ID | 5606347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 666376 |
End bp | 668619 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640936110 |
Product | TonB-dependent receptor |
Protein accession | YP_001476836 |
Protein GI | 157368847 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.520923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTT TCAATCGATC TGGGCTTTAT CTGGCGGTGA TGTCGGTGAT ATTGCCGGGG GCGGCGCTGG CGGCGGACTC GACCGACGTC GGTACCATCA GCGTAAAAGG GCAGTCGCTG GGCGGCGGCA TGATGGTGCA GGACGATAGC GCCAAAGGGC GTTCGACCGT CACCAAAGAG GCGATGGATA AAATGCCGGC GGCGGCCAAC GCCATCGACA AACTGAAATA TACCCCAGGC CTGAACGTCA ACAGCAACGA CGCCAGCGGC CTGAGCGGCG TCGATTACAC CATGCGCGGT ATGAACTCCG ATCAAATCGG CCTGTCGATG GACGGCATTC CGATTAACGA TTCCGGCAAC TACGCGGTTT ACCCAAACCT GCTGGGCGAC TCGGAAAACC TGGAGGAGGT GTTCGTCACC CAGGGGTCGT CTGAGGTGGA TGGCCCGCAT ATCGGTTCCA GCGGCGGCAA CATTGGTATG GTGACGCGCC GTCCGGCGAA AGATTTCGGT GGCTTCGTCA AACAGACGCT GGGCAGCAAC AACCTGAGCA AAACCTTCGC CCGTCTGGAG ACCGGTGAGT ACAACGGCTT CAGCAACTGG ATTTCCTACT CGCACACCGA GGCGAAAAAG TGGCGCGGAG AAGGGCGCGA GTACTCCAAC AAGTTCGAAA TGAACTCGTT GTATGAGGAC GGCAACGGCA ACAGCAGTAA CCTGATCATG AAGTACAACC AGCAGAATAA CGTCAACTAC AACACCCTGA GCAAGGCGCA GTTTGAAAAT GACGGCCGTT ATACCGACTA CGCCACCACG CCGGAGTACA ACAGCAAGGG CCAGTTGAAC AAGTACTACA AACTCAACCG CAACCCGTTT GACACCTTCA CGTTGTCGTT CACCCAGAAG CTGCAACTGC GCGACAACCT GGCGTTGACT CTGCAACCCT ATTACTACTG GGGTAATGGC GGCAGCTTCA CCGGCCAGAC CGCTTCGGTG TTGTCCAATA CTTCGGATAA GGCCGGTCAG TACGATCTGA GCAATTTGCA GTCCAACACC TATTACCGCC CTTCCTGGAC GCAAACCTGG CGGCCGGGCA TTACCACCAA GTTGAAGTGG GACATCAACG ATCAGCACAG CCTGGATATC GGCTACTGGT ATGAACGTGC GCGCCAGTCG CAGACCCAGC CGTTTATCGG CATCAAGGAC GACGGTAACC CGGAGCAACT CTCTGGCAAA CCGGGCGGCA GCGATCAGGT GAAGGACGCC AATGGCAAAA CCGTGCAGGG GCGCAACCAA TACACCATCA CCCCGGCGCA AAAAGTCTGG CTGCAGGACA CATGGTTCGC CACGCCGGAC TGGACCTTTG TCGGCGGGCT GGCTTATCAG TACGTTGAGC GAAAAGGGGA TAACAAGGGC AGCCTGTACA ATGTGCCGGA AAAGCGCGAT GCCAAATACC ATGAATTCCT GCCGAATTTC AGCGCCAGCT ACAAGCTGAA CCAGGAAAAC CAGGTGTTCT ACAACCTGAC GCGCAACATG CGTACTCCGC CGAACTACGT GCTGTACAAC GTGGGCGACT CGCTTAGTAC CAAGCCGGAA CTGAGCTGGA ACCACGAGCT GGGCTGGCGT TTCCAGCAGG AAAATATGCT GATGAGTGCC ACGCTGTTCT ATATGCGCTA CAGCGATCGT CAAATCTCCA CCACCAACTC GTCCGGCGAT TACGAGATGA TGAACATCGG TAATGTGGAG AACAAAGGGC TGGAGCTGGA GTGGAGCGGC CAGTTGCCGC ATAACTTCAA CTACTACACC TCGTACACTT ACACCCAGTC CAGGCAGAAG AGCGACATTG TCAGCAACGG CGGCCAGCCG CTGCCGACCA GTGGCAAAGA GGTGCCGAAC GTGCCGAAAA ACCTGCTTAA CATGACGTTG GGCTATGACG ATGGCCTGTA TTACAGCAGC GTCAGCGGCA AATACGTCAG TTCGTTCTAC GGCGACCTGA CTAACGACGA GAAGATCGGC GGCCGCACGG TGTTCGATCT GGCGGCGGGG GTGCATCTGC CGGTAGACAA GAAGATCGTC AAGAGCGCGG CGTTGCGCTT TGGTATCAGC AACCTGTTCG ACAAGGAGTA CCTGACATCG GTGCGCACCA CCACCTTCAA CGCAGCGCCG TATGGCGGCG TGAAGGCCAG TACGCCGTAC TACAACGTCG GGGAAGAACG TACCTTCAGC GTATCGCTGG AAGCCACCTT TTAA
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Protein sequence | MKSFNRSGLY LAVMSVILPG AALAADSTDV GTISVKGQSL GGGMMVQDDS AKGRSTVTKE AMDKMPAAAN AIDKLKYTPG LNVNSNDASG LSGVDYTMRG MNSDQIGLSM DGIPINDSGN YAVYPNLLGD SENLEEVFVT QGSSEVDGPH IGSSGGNIGM VTRRPAKDFG GFVKQTLGSN NLSKTFARLE TGEYNGFSNW ISYSHTEAKK WRGEGREYSN KFEMNSLYED GNGNSSNLIM KYNQQNNVNY NTLSKAQFEN DGRYTDYATT PEYNSKGQLN KYYKLNRNPF DTFTLSFTQK LQLRDNLALT LQPYYYWGNG GSFTGQTASV LSNTSDKAGQ YDLSNLQSNT YYRPSWTQTW RPGITTKLKW DINDQHSLDI GYWYERARQS QTQPFIGIKD DGNPEQLSGK PGGSDQVKDA NGKTVQGRNQ YTITPAQKVW LQDTWFATPD WTFVGGLAYQ YVERKGDNKG SLYNVPEKRD AKYHEFLPNF SASYKLNQEN QVFYNLTRNM RTPPNYVLYN VGDSLSTKPE LSWNHELGWR FQQENMLMSA TLFYMRYSDR QISTTNSSGD YEMMNIGNVE NKGLELEWSG QLPHNFNYYT SYTYTQSRQK SDIVSNGGQP LPTSGKEVPN VPKNLLNMTL GYDDGLYYSS VSGKYVSSFY GDLTNDEKIG GRTVFDLAAG VHLPVDKKIV KSAALRFGIS NLFDKEYLTS VRTTTFNAAP YGGVKASTPY YNVGEERTFS VSLEATF
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