Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0596 |
Symbol | |
ID | 5606143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 660603 |
End bp | 661457 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640936104 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001476830 |
Protein GI | 157368841 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTTTCA ATTACGCCAA ACTGAGAATT ATTCTCATGA CCTTTATCAC CGAGCCGCGT TTCGATATCG ATCAGGTACC GCGCGCCATT TTTGCCGTGC AGGGCTCCAC CATTGATAAA GATTGGGAGA TCACCCATCA CCGGCACCGC AAAGCACAGC TGATTTATAC GGTGCGCGGC ATGATCCGTT GCGAGGTGGA AAACGGTCTG TGGCTGGTGC CGCCACAGTG TGCGTTATGG ATGCCCAGCA ATGTGCTGCA TAACGCCCAG GGGGCCAGTG CCAGCGAGTG CTACTGCCTG TTTGTCGATC AGGATGCTAT CGCCGGGTTG CCGACCCACT GCTGTACGCT GGCGGTGTCC CCGCTGCTGC GTGAACTGCT GTTCCAGGCC AGCGCTTTCG AACAGCTGTA CGACCAACAA GGCCCGGAAG GACGATTGGC CGGCGTATTG TTGGATCAGT TGGTCAAGGC GCCGGTTGAG AATCTGCACC TGCCGGTCTC CAATGACGCG CGCATTCGCC AGTTAACAGA GCGGCTGCTG GCCAACCCGG CGGACAAGGC GACACTTGGC CAATGGGCGC AGCGTATCGG CATGAGCGAA CGCTCGCTCA ACCGCACTCT GCAACAACAA ATGGGCATGA GCTTTGGCCA CTGGCGGCGA CAATTGCACG TGGTGCTGGC GCTGCAACGG CTGACCCAGG GTGACAGCGT GCAACGGGTG GCGCTGGATC TGGGCTACGA AAGCGCCAGC GGTTTTGTCA CCATGTTCAG AAAAGCGGTG GGTAAACCGC CGGCGCGCTA TCTGGCAGAG AAAAACGCGG CGGACCGGGC GCAAGGGGCC GGGATCGTCA TGTAG
|
Protein sequence | MFFNYAKLRI ILMTFITEPR FDIDQVPRAI FAVQGSTIDK DWEITHHRHR KAQLIYTVRG MIRCEVENGL WLVPPQCALW MPSNVLHNAQ GASASECYCL FVDQDAIAGL PTHCCTLAVS PLLRELLFQA SAFEQLYDQQ GPEGRLAGVL LDQLVKAPVE NLHLPVSNDA RIRQLTERLL ANPADKATLG QWAQRIGMSE RSLNRTLQQQ MGMSFGHWRR QLHVVLALQR LTQGDSVQRV ALDLGYESAS GFVTMFRKAV GKPPARYLAE KNAADRAQGA GIVM
|
| |