Gene Spro_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0576 
Symbol 
ID5606638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp639807 
End bp641249 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content60% 
IMG OID640936084 
ProductPTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC 
Protein accessionYP_001476810 
Protein GI157368821 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.186926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA ATTACGCAGA GATCTCACCC GCTATCGTGA AGGCGCTGGG TGGCCTCACC 
AATATTGAAG CCGTGACCCA CTGCATGACC CGCCTGCGGT TCGTGGTGAA AGACAAGGCG
CTGATCGACA CCCTGGCGCT GAAAGCCATT AATGGCGTAT TGGGCGTGGT GCACAGCGGT
GAGCAATGCC AGGTGATCAT CGGCAATGAA GTGTCGAAGG CTTATCAGGC GGTGCTGGCG
CTCGGCATGC CGGGTAACCC CCCCACCGCC ACTCCGGCAA AACGCAAAAT CACCCTGAAA
GGCATTGGTG CCGGCATTCT CGACGCCCTG ATCGGCACCA TGTCGCCGTT GATCCCGGCC
ATCATCGGCG GTTCGATGGT GAAACTGCTG GCGATGATCC TGGATATGTT CGGCGTATTC
GAAAAAGGCT CGTCGACCCT GGTGATACTG AACGTGATTG GCGACGGCGC GTTCTTCTTC
CTGCCGGTGA TGGTGGCCGC CTCTGCGGCG CTGAAATTCA AAACCAACAT GTCACTGGCA
ATCGCCATTG CCGGGGTGCT GCTGCACCCC AACTTTATCG ACCTGATGGC CAAGGCGGCG
CAGGGCCAGG CGGTGGAGTT CGCCTACATC CCGGTGACGG CGGTGAAATA CACCTACACG
GTGATCCCCG CGCTGGTGAT GACCTGGATA TTGTCGTACA TCGAGCGCTG GGTCGATCGC
ATCACCCCGG CGGTGACCAA GAACTTCCTT AAGCCGATGC TGATTGTGCT GATTGCCGCG
CCGATCGCGA TAGTGTTTAT CGGCCCAGTC GGCATCTGGA TCGGCAGCGG GATTTCGGCG
CTGGTGTACA CCGTGCATGG TTATCTGGGC TGGCTTTCCG TCGCCATTAT GGGGGCCATT
TGGCCGCTGC TGGTGATGAC CGGCATGCAC CGCGTATTCA CGCCAACCAT CATTCAGACC
ATCGCCGAAA CCGGCAAAGA GGGCATGGTG ATGCCTTCGG AGATTGGTGC CAACCTGTCG
CTCGGCGGCT CTTCGCTGGC GGTGGCGTTC AAAACCAAGA ACCGCGAACT GCGCCAGACC
GCCTTGGCCG CTGCCGCTTC CGCCATTGTC GCGGGCATTT CCGAACCGGC ACTGTACGGC
GTGGCAGTGC GGCTCAAACG CCCGTTGATC GCCAGTTTGA TCAGCGGTTT TATCTGCGGT
GCCGTCGCCG GTCTCGGCGG GTTGGCCAGC CATTCGATGG CTTCGCCCGG CCTGTTCACC
AGCGTGCAGT TCTTCGACCC GACCAACCCG ATGAGCATAG TCTGGGTCGG CGGCGTGATG
GTGCTTGCCG TGGTGCTGTC ATTCGTGCTC ACGCTGCTGT TGGGCTTTGA AGACATTCCG
GAAAACGAAG AGGCCCCAAC GACAACCGCG CCTGCGGCCA ATACCGCTAA CGCTACCCAC
TGA
 
Protein sequence
MPKNYAEISP AIVKALGGLT NIEAVTHCMT RLRFVVKDKA LIDTLALKAI NGVLGVVHSG 
EQCQVIIGNE VSKAYQAVLA LGMPGNPPTA TPAKRKITLK GIGAGILDAL IGTMSPLIPA
IIGGSMVKLL AMILDMFGVF EKGSSTLVIL NVIGDGAFFF LPVMVAASAA LKFKTNMSLA
IAIAGVLLHP NFIDLMAKAA QGQAVEFAYI PVTAVKYTYT VIPALVMTWI LSYIERWVDR
ITPAVTKNFL KPMLIVLIAA PIAIVFIGPV GIWIGSGISA LVYTVHGYLG WLSVAIMGAI
WPLLVMTGMH RVFTPTIIQT IAETGKEGMV MPSEIGANLS LGGSSLAVAF KTKNRELRQT
ALAAAASAIV AGISEPALYG VAVRLKRPLI ASLISGFICG AVAGLGGLAS HSMASPGLFT
SVQFFDPTNP MSIVWVGGVM VLAVVLSFVL TLLLGFEDIP ENEEAPTTTA PAANTANATH