Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0537 |
Symbol | |
ID | 5606871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 594688 |
End bp | 595416 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640936046 |
Product | 20S proteasome A and B subunits |
Protein accession | YP_001476773 |
Protein GI | 157368784 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3484] Predicted proteasome-type protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.85615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTATT GTGTGGCCAT GCGCTTGTCA TCCGGGCTGG TCTTTGCTTC AGATTCGCGT ACCAATGCCG GAGTGGACCA TATTTCTACC TTCCGCAAAC TGCACGTGTT CCAGCAGGAC GGCGAACGCT TGCTGGTGCT GCAAAGTGCC GGCAATCTAG CGACCACCCA GAGCATCATC AGCCTGCTGC AGCGCCGCTG CAAAGACGCC GAACGCCCCA ATCTGCTGAA TGCGCCCAGT CTGTACGAAG CCGCCACGCT GGTGGGCGAA ACGGTGCGGG AAGTGATCCA ACGCGACAGC GAAGCCCAGC AGAGCGGCAG TACCACCGAT TTTAGCTGCA GCCTGTTGCT CGGCGGCCAG ATCCATGGCG AAGAGATGCG GCTGTTTCAT ATCTATCCGC AGGGTAACTT TATCGAAGCC ACCCGCGATA CGCCCTATTT CCAGATTGGC GAAAGCAAAT ACGGCAAACC AATTATTGAT CGGGTACTGA ACTACGATAC CCCGCTGGAA CAAGCGATGC AGTGCGCGCT AATCTCCCTC GATTCCACGC TACGCAGTAA CCTGTCGGTC GGCCTGCCGC TCGACGTGAT GATCTATCCG CGCGACAGTT TCAGCAGCGC ACAACAATAC CGTATTACCG AAGATCATCC GCATTTCAAC GCCATCCGCA AAGGCTGGGG CGAAGGGCTG GTCAGCATTT TCAAACAGTT GCCGCCGCTG CAGCTGTAG
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Protein sequence | MTYCVAMRLS SGLVFASDSR TNAGVDHIST FRKLHVFQQD GERLLVLQSA GNLATTQSII SLLQRRCKDA ERPNLLNAPS LYEAATLVGE TVREVIQRDS EAQQSGSTTD FSCSLLLGGQ IHGEEMRLFH IYPQGNFIEA TRDTPYFQIG ESKYGKPIID RVLNYDTPLE QAMQCALISL DSTLRSNLSV GLPLDVMIYP RDSFSSAQQY RITEDHPHFN AIRKGWGEGL VSIFKQLPPL QL
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