Gene Spro_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0537 
Symbol 
ID5606871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp594688 
End bp595416 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content57% 
IMG OID640936046 
Product20S proteasome A and B subunits 
Protein accessionYP_001476773 
Protein GI157368784 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3484] Predicted proteasome-type protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.85615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATT GTGTGGCCAT GCGCTTGTCA TCCGGGCTGG TCTTTGCTTC AGATTCGCGT 
ACCAATGCCG GAGTGGACCA TATTTCTACC TTCCGCAAAC TGCACGTGTT CCAGCAGGAC
GGCGAACGCT TGCTGGTGCT GCAAAGTGCC GGCAATCTAG CGACCACCCA GAGCATCATC
AGCCTGCTGC AGCGCCGCTG CAAAGACGCC GAACGCCCCA ATCTGCTGAA TGCGCCCAGT
CTGTACGAAG CCGCCACGCT GGTGGGCGAA ACGGTGCGGG AAGTGATCCA ACGCGACAGC
GAAGCCCAGC AGAGCGGCAG TACCACCGAT TTTAGCTGCA GCCTGTTGCT CGGCGGCCAG
ATCCATGGCG AAGAGATGCG GCTGTTTCAT ATCTATCCGC AGGGTAACTT TATCGAAGCC
ACCCGCGATA CGCCCTATTT CCAGATTGGC GAAAGCAAAT ACGGCAAACC AATTATTGAT
CGGGTACTGA ACTACGATAC CCCGCTGGAA CAAGCGATGC AGTGCGCGCT AATCTCCCTC
GATTCCACGC TACGCAGTAA CCTGTCGGTC GGCCTGCCGC TCGACGTGAT GATCTATCCG
CGCGACAGTT TCAGCAGCGC ACAACAATAC CGTATTACCG AAGATCATCC GCATTTCAAC
GCCATCCGCA AAGGCTGGGG CGAAGGGCTG GTCAGCATTT TCAAACAGTT GCCGCCGCTG
CAGCTGTAG
 
Protein sequence
MTYCVAMRLS SGLVFASDSR TNAGVDHIST FRKLHVFQQD GERLLVLQSA GNLATTQSII 
SLLQRRCKDA ERPNLLNAPS LYEAATLVGE TVREVIQRDS EAQQSGSTTD FSCSLLLGGQ
IHGEEMRLFH IYPQGNFIEA TRDTPYFQIG ESKYGKPIID RVLNYDTPLE QAMQCALISL
DSTLRSNLSV GLPLDVMIYP RDSFSSAQQY RITEDHPHFN AIRKGWGEGL VSIFKQLPPL
QL