Gene Spro_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0522 
Symbol 
ID5606287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp573650 
End bp574378 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content60% 
IMG OID640936031 
Productphosphonate metabolism transcriptional regulator PhnF 
Protein accessionYP_001476758 
Protein GI157368769 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02325] phosphonates metabolism transcriptional regulator PhnF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.498003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACT TATCTAGACA TCCGACCAGT TTCCCTACCC GCTACCAGCA AATCGCCGCG 
CAGCTAGAGC AAGAGCTGCG TACCCAATAC CGCTGCGGTG ACTATCTGCC TTCCGAACAA
CAGCTGGCAG AGCGCTATCA GGTTAATCGC CATACCCTGC GCCGCGCGGT TGACCAATTG
GTGGATCGCG GCTGGCTGCA ACGTCGACAC GGCATCGGCA TTTTGGTGCT GATGCGCCCC
TATGACTATC CGCTGCATGC CAATACCCGG TTCAGCCAGA ACCTGTTCGA GCAGGGCAGC
CACCCCACCA GTGAGCGCTT ACTCGCTGTA TTACGCCCGT GTAATGGGCA TGTTGCCAGT
GCACTGTCGC GTGAAGAAGG CGAAACGGTG ATCCACCTGC GTACCCTACG CCGGGTCAAC
GGCGTGCCGA TGAGCCTGAT CGACCATTAT CTGCCCGATC TGGACTGGTG GCCGGCGTTA
CAGCAGTTCC ACAGCGGTTC ATTGCACGAA TTTATCGAAC TCAACATCCA CCAGCCGCTG
ACCCGCAAGC AGACGCGCAT CAGCGCACGC CGCGCGCAGG CTAAAGAGAG CCGGTTGCTG
GAAATAGCCA CCCACGCGCC GCTGCTGTGC GTGCGCACCC TCAACGTCTG CACCGGCAGT
GACAGCGTGG CGGAATACTC CGTCAGCCTG GCACGCGCCG ACATGATTGA ACTGACCATG
GAGCACTGA
 
Protein sequence
MMDLSRHPTS FPTRYQQIAA QLEQELRTQY RCGDYLPSEQ QLAERYQVNR HTLRRAVDQL 
VDRGWLQRRH GIGILVLMRP YDYPLHANTR FSQNLFEQGS HPTSERLLAV LRPCNGHVAS
ALSREEGETV IHLRTLRRVN GVPMSLIDHY LPDLDWWPAL QQFHSGSLHE FIELNIHQPL
TRKQTRISAR RAQAKESRLL EIATHAPLLC VRTLNVCTGS DSVAEYSVSL ARADMIELTM
EH