| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0493 |
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| Symbol | |
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| ID | 5607233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 544235 |
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| End bp | 546352 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640936002 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001476729 |
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| Protein GI | 157368740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000650099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.24755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGACAC CGATCATTCG CAAATTCCAG TATGGCCAGC ATACCCTCAC TATTGAGACC
GGTATGATGG CTCGTCAGGC CACTGCCGCC GTTATGGTAA GCATGGATGA CACCGCAGTA
TTCGTTACCG TAGTTGGCCA GAAAAAAGCC AAACCAGGCC AGAGCTTCTT CCCACTGACG
GTTAACTATC AGGAGCGTAC CTACGCTGCT GGTCGTATCC CGGGTAGCTT CTTCCGTCGT
GAAGGCCGTC CGAGCGAAGG TGAAACCCTG ACCTCCCGTC TGATTGACCG TCCGATCCGT
CCACTGTTCC CGGACAGCTT CCTGAACGAA GTTCAGGTGA TCGCGACCGT TGTTTCCCTT
AACCCGCAGG TTAACCCGGA CATCGTTGCG ATGATCGGTG CCTCTGCCGC CCTGAGCCTG
TCCGGTATTC CGTTCAATGG CCCAATCGGT TCTGCGCGCG TGGGTTACAT CAACAATCAA
TACGTATTGA ACCCAACCAG CGACGAACTG AAAGAAAGCA GCCTGGATCT GGTGGTTGCC
GGTACCGCTG GCGCAGTACT GATGGTTGAA TCCGAAGCTG ACGTTCTGAG CGAAGATCAG
ATGCTGGGCG CGGTGGTGTT TGGCCACGAG CAACAGCAAA TCGTTATCGA AAACATTAAT
TCCCTGGTTG CCGAAGCCGG CAAAGCCAAG TGGGACTGGC AGGCACCTGC AGTCAACGAA
GCGCTGCACG CGCGCGTTGC AGAACTGGCA GAAGGCCGCC TGGGCGACGC TTATCACATC
ACCGAAAAAC AAGAGCGTTA CGCTCAGGTT GATGCGATCA AGAGCAGCGT TGTTGAAACC
CTGCTGGCAC AGGACGAAAC CCTGGACGTG TCTGAAATTC AGGACATCCT GGGTAGCGTT
GAGAAAAACG TCGTTCGTAG CCGTGTGCTG CGTGGCGAGC CGCGTATCGA CGGCCGTGAA
AAAGACATGA TCCGTGGTCT GGACGTGCGC ACCGGCGTTC TGCCGCGTAC CCACGGTTCC
GCACTGTTCA CCCGTGGTGA GACTCAGGCA CTGGTTACCG CAACGCTGGG CACCGCCCGT
GACGCGCAGA ACCTGGATGA GCTGATGGGC GAAAAGACCG ACAGCTTCCT GTTCCACTAT
AACTTCCCTC CGTACTCCGT TGGTGAGACC GGGATGGTAG GTTCGCCAAA ACGTCGTGAA
ATTGGTCACG GTCGCCTGGC GAAACGTGGC GTATTGGCTA TGATGCCTAA ACCAGAAGAT
TTCCCGTACA CGGTGCGTGT GGTTTCTGAA ATCACCGAAT CCAACGGTTC TTCTTCAATG
GCTTCCGTCT GTGGTGCTTC TCTGGCACTG ATGGATGCAG GTGTGCCAAT CAAGGCCGCC
GTTGCCGGTA TCGCAATGGG CCTGGTGAAA GAACAAGACA ACTTTGTTGT TCTGTCCGAC
ATTCTGGGTG ACGAAGATCA CCTGGGCGAC ATGGACTTCA AAGTAGCCGG TAGCCGTGAC
GGTATTACCG CGCTGCAGAT GGACATTAAA ATTGAAGGCA TCACCCGCGA AATCATGCAG
GTTGCTCTGA ACCAGGCCAA GGGCGCGCGT CTGCACATCC TGGGCGTGAT GGAACAGGCT
ATCAGCACTC CGCGTGGCGA TATCTCTCAG TTTGCACCAC GTATTCACAC TATCCGCATC
AACCCGGACA AGATCAAAGA CGTGATTGGT AAAGGCGGTT CTGTCATCCG TGCGCTGACT
GAAGAGACCG GCACTACCAT TGAAATCGAA GATGATGGTA CAGTTAAAAT TGCTGCTACC
GACGGTGAGA AAGCGAAATT CGCTATCCGC CGCATCGAAG AGATCACTGC CGAGATCGAA
GTGGGCCGTA TTTACCAGGG TAAAGTTACC CGTATCGTTG ATTTCGGCGC ATTCGTGGCG
ATCGGCGGCG GTAAAGAAGG TCTGGTGCAC ATCTCTCAAA TCGCTGACAA GCGCGTTGAG
AAAGTGACCG ACTATCTGCA GATGGGTCAG GAAGTACCGG TTAAGGTACT GGAAGTTGAC
CGTCAGGGCC GTGTGCGTCT GAGCATCAAA GAAGCGACCG CACCAGAAGC AGGTTCACCT
GCGCCTGAAG CAGAATAA
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| Protein sequence | MLTPIIRKFQ YGQHTLTIET GMMARQATAA VMVSMDDTAV FVTVVGQKKA KPGQSFFPLT
VNYQERTYAA GRIPGSFFRR EGRPSEGETL TSRLIDRPIR PLFPDSFLNE VQVIATVVSL
NPQVNPDIVA MIGASAALSL SGIPFNGPIG SARVGYINNQ YVLNPTSDEL KESSLDLVVA
GTAGAVLMVE SEADVLSEDQ MLGAVVFGHE QQQIVIENIN SLVAEAGKAK WDWQAPAVNE
ALHARVAELA EGRLGDAYHI TEKQERYAQV DAIKSSVVET LLAQDETLDV SEIQDILGSV
EKNVVRSRVL RGEPRIDGRE KDMIRGLDVR TGVLPRTHGS ALFTRGETQA LVTATLGTAR
DAQNLDELMG EKTDSFLFHY NFPPYSVGET GMVGSPKRRE IGHGRLAKRG VLAMMPKPED
FPYTVRVVSE ITESNGSSSM ASVCGASLAL MDAGVPIKAA VAGIAMGLVK EQDNFVVLSD
ILGDEDHLGD MDFKVAGSRD GITALQMDIK IEGITREIMQ VALNQAKGAR LHILGVMEQA
ISTPRGDISQ FAPRIHTIRI NPDKIKDVIG KGGSVIRALT EETGTTIEIE DDGTVKIAAT
DGEKAKFAIR RIEEITAEIE VGRIYQGKVT RIVDFGAFVA IGGGKEGLVH ISQIADKRVE
KVTDYLQMGQ EVPVKVLEVD RQGRVRLSIK EATAPEAGSP APEAE
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