Gene Spro_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0477 
Symbol 
ID5607299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp527026 
End bp528087 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content55% 
IMG OID640935984 
Productsensor protein BasS/PmrB 
Protein accessionYP_001476713 
Protein GI157368724 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000367453 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.9008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA TGCGCCGTCG TCTGTTGTTG ATGCTGGCGC TGATCCTTTT GGTCACCCAG 
CTTATCAGTG CCTTTTGGTT GTGGCATGAA AGCCAAGAGC AAATCAGCTT CCTGGTGGAT
GAAACCCTGT CGGCCAAGGT TCGCACCGAG CGTGTCGATA CGGAAATCGC CGAAGCAATA
GCCTCACTGC TCGCCCCTTC ACTGATCATG ATGGTCGTGA CTTTGCTCGC CTCATTTTGG
GCTATCAGCT GGATTATCCG CCCGCTCAAT CAGTTGCAAC AACGGCTGGA AAAGCGTTCT
GCCGATAACC TGACGCCGCT GCCGCTTAAC AGCGACAGCC TCGAAATAAT GTCGGTCACC
ACTACGCTCA ACCAATTGTT CTCGCGGCTG GATAACACCA TCCAGCAGGA ACGGCTGTTT
ACTGCCGACG CCGCCCATGA GCTACGCACG CCTCTGGCGG GCATCCGCCT GCATCTGGAG
TTAATGGAAA AACAGGGGGT CCCGCAAAGT GGGCCACTGA TTAAGCGCAT TGACCAACTG
ATGCACACCG TCGAACAATT GCTGATGCTT GCACGCGCCG GGCAAGATTT TGCCAGTGGC
CATTATCAAC GCTTCGATTG GGTGAGCGAT GTGATCCAAC CGCTGCGGGA AGAGCTCGAG
GAGTTGGCCA CACAACGCGG GCAAAGTTTG CAATGGCAGC TTCCGACCAC CGCCCCGGTG
CATGGTGACC CGGTACTGTT ACGTCTGCTG CTGCGTAACC TGGTGGAGAA TGCCCATCGT
TATAGCCCTG AGGGTAGCAG GATCCAGGTA CAACTTTCTG CGCAGGAACG CGGTTACCGG
CTACAGGTGA TCGATGAAGG TCCGGGCGTC AAAGAGAAAA TAACGGGTGA ACTCACGCAG
GCCTTCCGCC GCATGGATCA ACGCTATGGC GGCAGTGGGT TGGGATTGAA TATCGTAACT
CGTATTGTGC AGCTGCATCA GGGGCGTTTA ACACTGGAAA ACCGCCAGGA CACCAGCGGG
CTCAATGCAC AATGCTGGCT CCCGGAAAAC GTCCTGAAAT AA
 
Protein sequence
MISMRRRLLL MLALILLVTQ LISAFWLWHE SQEQISFLVD ETLSAKVRTE RVDTEIAEAI 
ASLLAPSLIM MVVTLLASFW AISWIIRPLN QLQQRLEKRS ADNLTPLPLN SDSLEIMSVT
TTLNQLFSRL DNTIQQERLF TADAAHELRT PLAGIRLHLE LMEKQGVPQS GPLIKRIDQL
MHTVEQLLML ARAGQDFASG HYQRFDWVSD VIQPLREELE ELATQRGQSL QWQLPTTAPV
HGDPVLLRLL LRNLVENAHR YSPEGSRIQV QLSAQERGYR LQVIDEGPGV KEKITGELTQ
AFRRMDQRYG GSGLGLNIVT RIVQLHQGRL TLENRQDTSG LNAQCWLPEN VLK