Gene Spro_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0472 
Symbol 
ID5603504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp522892 
End bp523863 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content54% 
IMG OID640935979 
Productoctaprenyl diphosphate synthase 
Protein accessionYP_001476708 
Protein GI157368719 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000437093 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAG AGCAAATTAC CGAGTTAACC GCGCAAGATA TGGCGGCCGT GAACGCAACA 
ATTCTCGAAC AGCTGAATTC CGATGTCACG CTCATCAATC AGCTTGGCTA TTACATTATC
AGTGGTGGCG GTAAACGCAT CCGCCCGATG ATCGCCGTTC TGGCGGCGCG GGCTTTGCAT
TATCAGGGTG ATAAACACAT TACCGTTGCC GCGCTGATCG AATTCATTCA CACCGCAACT
CTACTGCATG ATGACGTGGT GGATGAATCA GATATGCGCC GCGGCAAGGC CACCGCCAAT
GCCGCCTTCG GCAATGCCGC CAGCGTCCTG GTCGGCGACT TCATCTATAC GCGTGCTTTC
CAGATGATGA CCAGTCTGGA ATCGCTGCGC GTGCTGGCAC TGATGTCTGA GGCGGTCAAC
GTGATTGCCG AAGGTGAAGT TCTGCAGTTA ATGAACGTCA ACGATCCTGA CATTACCGAA
GAAAGCTACA TGCGGGTGAT CTACAGCAAA ACCGCACGTC TGTTTGAAGC GGCGGCGCAA
TCTTCAGCAA TCCTGTCAGA CGCTAGCGTT GCAGAAGAAA AAGCGCTGCA GGATTACGGT
CGCTATCTCG GCACCGCTTT CCAGTTGATC GACGATCTGC TCGATTACAG TGCCGACGGC
AGTACACTGG GTAAAAATAC CGGTGACGAT CTCAATGAAG GGAAGCCGAC ATTGCCGCTA
CTGCACGCCA TGCATAACAG CGAAGGCGAG CAGAAAGCCA TGATCCGCGG GGCGATTGAA
CAGGGTAACG GCCGTCATTT GCTGGAACCG GTGTTGCAAG CCATGCAGCA ATGCGGCTCA
CTGGAGTATA CCCGCCAACG GGCTGAGGAA GAGGCTGACA AGGCCATTGC CGCCTTGCAG
GTTCTACCCG AATCGCCACA TCGTTCCGCG CTGGAAGGAT TAGCGCACCT TGCGGTCCAA
CGCGATTTTT AA
 
Protein sequence
MNLEQITELT AQDMAAVNAT ILEQLNSDVT LINQLGYYII SGGGKRIRPM IAVLAARALH 
YQGDKHITVA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDFIYTRAF
QMMTSLESLR VLALMSEAVN VIAEGEVLQL MNVNDPDITE ESYMRVIYSK TARLFEAAAQ
SSAILSDASV AEEKALQDYG RYLGTAFQLI DDLLDYSADG STLGKNTGDD LNEGKPTLPL
LHAMHNSEGE QKAMIRGAIE QGNGRHLLEP VLQAMQQCGS LEYTRQRAEE EADKAIAALQ
VLPESPHRSA LEGLAHLAVQ RDF