Gene Spro_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0465 
Symbol 
ID5603428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp517301 
End bp518680 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content58% 
IMG OID640935972 
ProductUDP-N-acetylmuramate 
Protein accessionYP_001476701 
Protein GI157368712 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000115879 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.920724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC ACATTCTTGG GATCTGTGGC ACCTTTATGG GCGGGCTGGC GGTGCTGGCT 
CGTTCGCTAG GGCATGAGGT GACCGGCTCT GACGCTAATG TCTATCCGCC GATGAGCACG
CTGTTGGAGA AAGAAGGGAT CGCACTGATC CAGGGCTACG ATCCGGCTCA GTTGGATCCT
GCACCGGATC TGGTGATCAT CGGTAACGCC ATGACGCGCG GTAATCCGTG TGTTGAAGCA
GTACTGGAGC AGGGCATCCC TTACGTTTCC GGCCCGCAGT GGCTGCATGA TTATGTGCTG
CGCGATCGCT GGGTACTGGC CGTTGCCGGG ACACACGGCA AGACCACCAC CGCCGGCATG
GCAACCTGGA TCCTGGAAGC CTGCGGCTAC CAGCCGGGCT TTGTTATCGG TGGCGTGCCG
GGCAACTTTG ACGTTTCTGC TCGCCTGGGG GGCAGCCCGT TCTTTGTCAT CGAAGCCGAT
GAATATGACT GCGCGTTCTT CGACAAGCGT TCCAAGTTTG TGCATTACAG CCCGCGTACG
CTGATCCTGA ACAATCTGGA GTTTGATCAC GCCGATATCT TCGACGATCT GAAAGCGATC
CAGAAACAGT TCCACCATCT GGTGCGTTTG GTGCCAGGCA AGGGCAAAAT TATTTTGCCT
GATAACGACA GCCACCTGAA ACAGGTGATG GCGATGGGCT GCTGGAGCGA GCAGGAGCTG
GTTGGGGAAG AAGGCGCATG GCGTGCACAG AAACTGACGC CGGACGCCAG CCATTATGCG
GTTTTCCTTA ATGGTGAGCA GGTGGGCGAA GTTAAGTGGT CGCTGGTCGG TGAACACAAC
ATGCATAACG GTTTGATGGC CATTGCCGCC ACGCGCCATG TGGGTGTGTT GCCTGAAGAT
GCCTGCCGCG CGCTCGGCGA TTTTATCAAT GCCCGCCGTC GTCTGGAGCT GCGTGGTGAA
GCCAATGGCG TCACGGTATA TGACGACTTT GCCCATCATC CAACGGCAAT TCTGGCGACC
CTGGCTGCGT TGCGTAGCAA GGTGGGTGGC ACTGCCCGCA TTCTGGCGGT GCTTGAGCCG
CGCTCCAACA CCATGAAAAT GGGCATCAGC AAGAACGATC TGGCCCCGTC GCTGGGTCGT
GCCGATGAAG TCTTCCTGTT CCAGCCGCAC CATATCCCCT GGCAGGTGGC GGAAGTGGCG
GAAGCCTGCG TACAGCCGGC CCACTGGAGC GCCGATCTGG ATACGCTGGT GGATATGATC
GTGAAAACGG CTCAGCCGGG CGACCATATT CTGGTGATGA GTAACGGCGG CTTTGGGGGT
ATTCACGATC GGCTGCTGGA GGCTTTGGCC AACAAACCCG ATCCGAAAGC CACCTATTGA
 
Protein sequence
MRIHILGICG TFMGGLAVLA RSLGHEVTGS DANVYPPMST LLEKEGIALI QGYDPAQLDP 
APDLVIIGNA MTRGNPCVEA VLEQGIPYVS GPQWLHDYVL RDRWVLAVAG THGKTTTAGM
ATWILEACGY QPGFVIGGVP GNFDVSARLG GSPFFVIEAD EYDCAFFDKR SKFVHYSPRT
LILNNLEFDH ADIFDDLKAI QKQFHHLVRL VPGKGKIILP DNDSHLKQVM AMGCWSEQEL
VGEEGAWRAQ KLTPDASHYA VFLNGEQVGE VKWSLVGEHN MHNGLMAIAA TRHVGVLPED
ACRALGDFIN ARRRLELRGE ANGVTVYDDF AHHPTAILAT LAALRSKVGG TARILAVLEP
RSNTMKMGIS KNDLAPSLGR ADEVFLFQPH HIPWQVAEVA EACVQPAHWS ADLDTLVDMI
VKTAQPGDHI LVMSNGGFGG IHDRLLEALA NKPDPKATY