Gene Spro_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0431 
Symbolhfq 
ID5602862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp483169 
End bp483477 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content50% 
IMG OID640935938 
ProductRNA-binding protein Hfq 
Protein accessionYP_001476667 
Protein GI157368678 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000376356 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000212811 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTAAGG GGCAATCTTT GCAAGATCCG TTCCTGAACG CATTGCGTCG TGAACGTGTT 
CCGGTTTCTA TTTATTTGGT GAATGGTATT AAGCTGCAAG GCCAGATTGA GTCTTTTGAC
CAGTTTGTCA TCCTGTTGAA AAACACGGTG AGCCAGATGG TTTATAAGCA CGCTATCTCT
ACCGTTGTCC CGTCACGCCC GGTTTCGCAC CATAGCAATA CTCCGAGCGG CGGCACCAGT
AACTATCACC ATGGTAACAA CCCGTCTGCG CCGCAACAGC CGCAGCAGGA AAGCGATGAC
GCTGAATAA
 
Protein sequence
MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS 
TVVPSRPVSH HSNTPSGGTS NYHHGNNPSA PQQPQQESDD AE