| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0411 |
|---|
| Symbol | |
|---|
| ID | 5602691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 460800 |
|---|
| End bp | 461828 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640935915 |
|---|
| Product | lysine 2,3-aminomutase YodO family protein |
|---|
| Protein accession | YP_001476647 |
|---|
| Protein GI | 157368658 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000821427 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACACA TTATAACCCA AAATACGGCA TATAGAGAAG ATTGGTTGCA TCAACTCGCC
GATGTTATTA CCGATCCCGA TGAATTACTG CAGCTTTTGT CACTGAATAC GCATCCGGAA
TTGCCACAGG GCCGTGAAGC CCGCCGGTTG TTTGCGCTGC GCGTCCCCCG CTCTTTCGTA
GCCCGCATGC AGCCTGGCGA TGCCAATGAC CCGCTGCTGC GCCAGGTTCT GACTGCCAGC
GAAGAATTCA TCAATGCGCC TGGCTTCACC ACCGATCCGC TTGATGAACA GCGTAGCGTA
GTGCCGGGGC TGCTGCATAA ATACCGTAAT CGTGCTTTGC TGCTGGTTAA GGGCGGCTGT
GCGGTCAACT GCCGCTACTG CTTCCGCCGC CATTTTCCGT ATCAGGACAA CCAGGGCAAT
AAGGCCAACT GGCGTCAGGC GCTGGATTAT ATCCGCCAAC ACCCGGAACT CGATGAGATT
ATTTTCTCGG GTGGCGATCC GCTGATGGCA AAAGACCATG AGCTGGACTG GCTAATCGGT
GAACTGGAAG CCATTGAGCA TCTAAAACGT CTGCGTATTC ACACCCGCTT GCCGGTGGTT
ATCCCCGCGC GAATTACACC GGAGCTGTGC CGGCGGCTGT CGGCATCGCG CCTGCAGGTG
CTGATGGTCA CGCACATCAA CCATGCCAAT GAGATTGACC GCGAACTGCA GGCCAGCATG
GCGCAACTGC GTCTGGCTGG CGTCACGCTA CTGAATCAAA GCGTGCTGCT GCGCGGTATT
AATGACGATG CCGATACGCT GGCGGCACTG AGCAACGCGT TGTTTGACGC AGGCATTCTG
CCTTATTACA TCCACGTACT GGATAAGGTG CAGGGGGCTG CACACTTTAT GGTCAGTGAT
GATGAAGCAC GCACTATCAT GCAGGCGCTG CTGGGCAAGA TTTCCGGCTA TATGGTGCCA
CGCTTGACCC GTGAGGTCGG CGGTAAGCCA AGCAAAACCC CTCTCGATCT GCACCTGATG
CAAGACTGA
|
|---|
| Protein sequence | MAHIITQNTA YREDWLHQLA DVITDPDELL QLLSLNTHPE LPQGREARRL FALRVPRSFV
ARMQPGDAND PLLRQVLTAS EEFINAPGFT TDPLDEQRSV VPGLLHKYRN RALLLVKGGC
AVNCRYCFRR HFPYQDNQGN KANWRQALDY IRQHPELDEI IFSGGDPLMA KDHELDWLIG
ELEAIEHLKR LRIHTRLPVV IPARITPELC RRLSASRLQV LMVTHINHAN EIDRELQASM
AQLRLAGVTL LNQSVLLRGI NDDADTLAAL SNALFDAGIL PYYIHVLDKV QGAAHFMVSD
DEARTIMQAL LGKISGYMVP RLTREVGGKP SKTPLDLHLM QD
|
|---|
| |