| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0407 |
|---|
| Symbol | |
|---|
| ID | 5602705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 457427 |
|---|
| End bp | 457963 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640935911 |
|---|
| Product | FxsA cytoplasmic membrane protein |
|---|
| Protein accession | YP_001476643 |
|---|
| Protein GI | 157368654 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000598629 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCCAC TGTGCGGCAA CGTAGATCTG CCAGAGGAGA ACCAGGTGCG CTGGTTACCG
TTACTGCTGA TATTTTTATT GGCTTACATA GAAATATCGC TATTTATCAA AGTCGCTGCC
GTCATGGGCG TAGCGATCAC CCTGTTGTTG GTGGTGTTTA CCTCCTGCGT CGGCATTTCG
CTGGTGCGTA ATCAGGGCAT GAAAACTTTC ATGCAGATGC AACAGAAGCT GGCCGCGGGT
GAAAGCCCGG CGGCGGAAAT GGTGAAGAGC GTTTCACTGG TACTGGCGGG CTTCCTGCTG
CTGGTGCCGG GATTCTTTAC CGACTTCCTT GGCCTGTTGC TACTGCTGCC GCCGGTGCAG
AAGTCGTTGA CGCTGAAGCT GATGCCGCAT CTTTCCGTCT ACCGTCCTGG CGGTTGGGGA
ACGGGTGGCG ATGCTGCCAA CGGCAACACC TTTGACGGTG AGTTTCAACG TAAGAGTGAC
GATCGTTATA CCCTGGGAAG CCAGCCTGAA GATCGTGACA AACCTAACGA CAGATAA
|
|---|
| Protein sequence | MSPLCGNVDL PEENQVRWLP LLLIFLLAYI EISLFIKVAA VMGVAITLLL VVFTSCVGIS
LVRNQGMKTF MQMQQKLAAG ESPAAEMVKS VSLVLAGFLL LVPGFFTDFL GLLLLLPPVQ
KSLTLKLMPH LSVYRPGGWG TGGDAANGNT FDGEFQRKSD DRYTLGSQPE DRDKPNDR
|
|---|
| |